Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 MIR663A-201ENST00000385250 93 ntBASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 CDCA4P2-201ENST00000441182 718 ntBASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 RARRES2P6-201ENST00000567333 442 ntBASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 HLA-B-256ENST00000639848 1089 ntBASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
NUDCD3Q8IVD9 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 AL160286.2-201ENST00000567150 934 ntBASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NUDCD3Q8IVD9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.61■□□□□ 0.57
NUDCD3Q8IVD9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms