Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 IKBKGP1-201ENST00000612193 1073 ntBASIC19.37■□□□□ 0.69
CCDC25Q86WR0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.37■□□□□ 0.69
CCDC25Q86WR0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC25Q86WR0 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 AP000997.3-201ENST00000623333 2250 ntBASIC19.36■□□□□ 0.69
CCDC25Q86WR0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 CROCCP5-201ENST00000436658 830 ntBASIC19.36■□□□□ 0.69
CCDC25Q86WR0 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 AC083906.2-201ENST00000511578 360 ntBASIC19.36■□□□□ 0.69
CCDC25Q86WR0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 AC073592.3-201ENST00000625118 1834 ntBASIC19.36■□□□□ 0.69
CCDC25Q86WR0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC25Q86WR0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.35■□□□□ 0.69
CCDC25Q86WR0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 AC120498.8-201ENST00000614275 531 ntBASIC19.35■□□□□ 0.69
CCDC25Q86WR0 HLA-B-256ENST00000639848 1089 ntBASIC19.35■□□□□ 0.69
CCDC25Q86WR0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.35■□□□□ 0.69
CCDC25Q86WR0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC25Q86WR0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC25Q86WR0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms