Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AC087633.2-202ENST00000565166 1439 ntBASIC16.32■□□□□ 0.2
C11orf88Q6PI97 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AC066615.1-201ENST00000640911 628 ntBASIC16.32■□□□□ 0.2
C11orf88Q6PI97 AP006294.2-201ENST00000641667 209 ntBASIC16.32■□□□□ 0.2
C11orf88Q6PI97 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C11orf88Q6PI97 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ADM-205ENST00000528544 586 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CYP2T3P-201ENST00000601990 817 ntBASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C11orf88Q6PI97 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 CYP21A1P-202ENST00000354927 1481 ntBASIC16.3■□□□□ 0.2
C11orf88Q6PI97 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 KRT8P20-201ENST00000423953 1409 ntBASIC16.3■□□□□ 0.2
C11orf88Q6PI97 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 ESRRAP1-201ENST00000400596 1257 ntBASIC16.3■□□□□ 0.2
C11orf88Q6PI97 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 AL031963.3-201ENST00000606441 850 ntBASIC16.3■□□□□ 0.2
C11orf88Q6PI97 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 Z98044.1-201ENST00000632503 1764 ntBASIC16.3■□□□□ 0.2
C11orf88Q6PI97 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.3■□□□□ 0.2
C11orf88Q6PI97 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
C11orf88Q6PI97 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms