Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNA1Q09470 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KCNA1Q09470 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 MCCD1P1-208ENST00000445732 328 ntBASIC20.58■□□□□ 0.89
KCNA1Q09470 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNA1Q09470 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.58■□□□□ 0.89
KCNA1Q09470 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.58■□□□□ 0.89
KCNA1Q09470 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
KCNA1Q09470 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
KCNA1Q09470 AC036111.1-201ENST00000533973 1582 ntBASIC20.58■□□□□ 0.88
KCNA1Q09470 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNA1Q09470 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNA1Q09470 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNA1Q09470 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNA1Q09470 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.58■□□□□ 0.88
KCNA1Q09470 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KCNA1Q09470 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 AL138781.2-201ENST00000617896 1843 ntBASIC20.57■□□□□ 0.88
KCNA1Q09470 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNA1Q09470 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 CR769767.2-201ENST00000622735 460 ntBASIC20.57■□□□□ 0.88
KCNA1Q09470 AC010653.2-201ENST00000623505 997 ntBASIC20.57■□□□□ 0.88
KCNA1Q09470 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
KCNA1Q09470 AC097493.4-201ENST00000641197 219 ntBASIC20.57■□□□□ 0.88
KCNA1Q09470 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNA1Q09470 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNA1Q09470 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.57■□□□□ 0.88
KCNA1Q09470 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
KCNA1Q09470 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 WIZP1-201ENST00000531444 2299 ntBASIC20.56■□□□□ 0.88
KCNA1Q09470 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNA1Q09470 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
KCNA1Q09470 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
KCNA1Q09470 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNA1Q09470 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNA1Q09470 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.56■□□□□ 0.88
KCNA1Q09470 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNA1Q09470 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
KCNA1Q09470 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.56■□□□□ 0.88
KCNA1Q09470 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KCNA1Q09470 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
KCNA1Q09470 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
KCNA1Q09470 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 AC005082.1-201ENST00000413042 2259 ntBASIC20.55■□□□□ 0.88
KCNA1Q09470 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.55■□□□□ 0.88
KCNA1Q09470 AC128688.1-201ENST00000487626 519 ntBASIC20.55■□□□□ 0.88
KCNA1Q09470 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
KCNA1Q09470 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
KCNA1Q09470 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.55■□□□□ 0.88
KCNA1Q09470 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
KCNA1Q09470 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
KCNA1Q09470 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms