Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM11AP58511 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.32■□□□□ 0.36
SMIM11AP58511 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SMIM11AP58511 AC133041.1-202ENST00000642053 222 ntBASIC17.32■□□□□ 0.36
SMIM11AP58511 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM11AP58511 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM11AP58511 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.32■□□□□ 0.36
SMIM11AP58511 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.32■□□□□ 0.36
SMIM11AP58511 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMIM11AP58511 AC126763.1-201ENST00000552015 2118 ntBASIC17.32■□□□□ 0.36
SMIM11AP58511 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SMIM11AP58511 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.31■□□□□ 0.36
SMIM11AP58511 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.31■□□□□ 0.36
SMIM11AP58511 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SMIM11AP58511 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.31■□□□□ 0.36
SMIM11AP58511 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.31■□□□□ 0.36
SMIM11AP58511 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SMIM11AP58511 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.31■□□□□ 0.36
SMIM11AP58511 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SMIM11AP58511 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.3■□□□□ 0.36
SMIM11AP58511 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.3■□□□□ 0.36
SMIM11AP58511 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM11AP58511 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM11AP58511 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.3■□□□□ 0.36
SMIM11AP58511 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.3■□□□□ 0.36
SMIM11AP58511 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM11AP58511 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SMIM11AP58511 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.3■□□□□ 0.36
SMIM11AP58511 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM11AP58511 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
SMIM11AP58511 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
SMIM11AP58511 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMIM11AP58511 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM11AP58511 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM11AP58511 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.29■□□□□ 0.36
SMIM11AP58511 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM11AP58511 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.29■□□□□ 0.36
SMIM11AP58511 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.29■□□□□ 0.36
SMIM11AP58511 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.29■□□□□ 0.36
SMIM11AP58511 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMIM11AP58511 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMIM11AP58511 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.28■□□□□ 0.36
SMIM11AP58511 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.28■□□□□ 0.36
SMIM11AP58511 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMIM11AP58511 KRT8P41-201ENST00000533985 1514 ntBASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms