Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN2P57739 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN2P57739 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.51■□□□□ 0.55
CLDN2P57739 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.51■□□□□ 0.55
CLDN2P57739 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.51■□□□□ 0.55
CLDN2P57739 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CLDN2P57739 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.51■□□□□ 0.55
CLDN2P57739 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 KRT8P32-201ENST00000512863 1461 ntBASIC18.51■□□□□ 0.55
CLDN2P57739 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CLDN2P57739 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN2P57739 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN2P57739 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.51■□□□□ 0.55
CLDN2P57739 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.51■□□□□ 0.55
CLDN2P57739 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN2P57739 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CLDN2P57739 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.5■□□□□ 0.55
CLDN2P57739 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CLDN2P57739 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.5■□□□□ 0.55
CLDN2P57739 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.5■□□□□ 0.55
CLDN2P57739 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CLDN2P57739 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CLDN2P57739 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN2P57739 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN2P57739 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN2P57739 MIR564-202ENST00000385049 94 ntBASIC18.49■□□□□ 0.55
CLDN2P57739 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN2P57739 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.49■□□□□ 0.55
CLDN2P57739 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.49■□□□□ 0.55
CLDN2P57739 MIR3917-201ENST00000580971 93 ntBASIC18.49■□□□□ 0.55
CLDN2P57739 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.49■□□□□ 0.55
CLDN2P57739 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN2P57739 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CLDN2P57739 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CLDN2P57739 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CLDN2P57739 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN2P57739 KRT18P48-201ENST00000434763 852 ntBASIC18.48■□□□□ 0.55
CLDN2P57739 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.48■□□□□ 0.55
CLDN2P57739 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.48■□□□□ 0.55
CLDN2P57739 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN2P57739 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CLDN2P57739 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CLDN2P57739 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CLDN2P57739 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CLDN2P57739 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.48■□□□□ 0.55
CLDN2P57739 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.47■□□□□ 0.55
CLDN2P57739 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
CLDN2P57739 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.47■□□□□ 0.55
CLDN2P57739 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CLDN2P57739 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms