Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 UNC93B5-201ENST00000530315 699 ntBASIC17.14■□□□□ 0.33
HMGA2P52926 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HMGA2P52926 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGA2P52926 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGA2P52926 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGA2P52926 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGA2P52926 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGA2P52926 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 AC008403.3-201ENST00000598924 454 ntBASIC17.13■□□□□ 0.33
HMGA2P52926 MTDHP1-201ENST00000605323 784 ntBASIC17.13■□□□□ 0.33
HMGA2P52926 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.13■□□□□ 0.33
HMGA2P52926 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 GNAS-203ENST00000306120 1878 ntBASIC17.13■□□□□ 0.33
HMGA2P52926 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
HMGA2P52926 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGA2P52926 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGA2P52926 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.12■□□□□ 0.33
HMGA2P52926 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
HMGA2P52926 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
HMGA2P52926 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.12■□□□□ 0.33
HMGA2P52926 KRT18P41-201ENST00000518924 1277 ntBASIC17.12■□□□□ 0.33
HMGA2P52926 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 AL445675.2-201ENST00000620291 557 ntBASIC17.12■□□□□ 0.33
HMGA2P52926 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.12■□□□□ 0.33
HMGA2P52926 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
HMGA2P52926 AC134043.2-201ENST00000624206 2238 ntBASIC17.12■□□□□ 0.33
HMGA2P52926 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.12■□□□□ 0.33
HMGA2P52926 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.11■□□□□ 0.33
HMGA2P52926 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 LINC00896-202ENST00000609602 2128 ntBASIC17.11■□□□□ 0.33
HMGA2P52926 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
HMGA2P52926 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.11■□□□□ 0.33
HMGA2P52926 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.11■□□□□ 0.33
HMGA2P52926 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
HMGA2P52926 AC142086.2-201ENST00000569753 217 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms