Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.29■□□□□ 0.84
TNFSF9P41273 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.29■□□□□ 0.84
TNFSF9P41273 AC022616.7-201ENST00000525383 220 ntBASIC20.29■□□□□ 0.84
TNFSF9P41273 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF9P41273 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.29■□□□□ 0.84
TNFSF9P41273 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.29■□□□□ 0.84
TNFSF9P41273 AL445228.2-201ENST00000605589 952 ntBASIC20.29■□□□□ 0.84
TNFSF9P41273 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TNFSF9P41273 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.29■□□□□ 0.84
TNFSF9P41273 AC098818.2-201ENST00000564925 2320 ntBASIC20.28■□□□□ 0.84
TNFSF9P41273 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF9P41273 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF9P41273 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF9P41273 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF9P41273 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFSF9P41273 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFSF9P41273 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.28■□□□□ 0.84
TNFSF9P41273 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 KRT18P35-201ENST00000510488 1269 ntBASIC20.28■□□□□ 0.84
TNFSF9P41273 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.28■□□□□ 0.84
TNFSF9P41273 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.28■□□□□ 0.84
TNFSF9P41273 NTF6B-201ENST00000591913 560 ntBASIC20.28■□□□□ 0.84
TNFSF9P41273 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TNFSF9P41273 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TNFSF9P41273 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TNFSF9P41273 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 Z98044.1-201ENST00000632503 1764 ntBASIC20.27■□□□□ 0.84
TNFSF9P41273 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 KRT18P38-201ENST00000449496 1282 ntBASIC20.27■□□□□ 0.84
TNFSF9P41273 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.27■□□□□ 0.84
TNFSF9P41273 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.27■□□□□ 0.84
TNFSF9P41273 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.27■□□□□ 0.84
TNFSF9P41273 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TNFSF9P41273 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TNFSF9P41273 AC087289.5-201ENST00000586076 3175 ntBASIC20.27■□□□□ 0.84
TNFSF9P41273 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.27■□□□□ 0.83
TNFSF9P41273 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 AP000523.1-201ENST00000398242 1049 ntBASIC20.26■□□□□ 0.83
TNFSF9P41273 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC20.26■□□□□ 0.83
TNFSF9P41273 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TNFSF9P41273 AL359075.1-203ENST00000462729 1002 ntBASIC20.26■□□□□ 0.83
TNFSF9P41273 SEC1P-202ENST00000473944 940 ntBASIC20.26■□□□□ 0.83
TNFSF9P41273 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC20.26■□□□□ 0.83
TNFSF9P41273 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC20.26■□□□□ 0.83
TNFSF9P41273 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TNFSF9P41273 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.26■□□□□ 0.83
TNFSF9P41273 AL031432.5-201ENST00000641059 760 ntBASIC20.26■□□□□ 0.83
TNFSF9P41273 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TNFSF9P41273 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TNFSF9P41273 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 KRT18P23-201ENST00000435622 1283 ntBASIC20.25■□□□□ 0.83
TNFSF9P41273 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.25■□□□□ 0.83
TNFSF9P41273 AC112497.1-201ENST00000624824 639 ntBASIC20.25■□□□□ 0.83
TNFSF9P41273 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TNFSF9P41273 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.25■□□□□ 0.83
TNFSF9P41273 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms