Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.83■□□□□ 0.61
KRT4P19013 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 ESPNP-201ENST00000270691 2015 ntBASIC18.83■□□□□ 0.61
KRT4P19013 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.83■□□□□ 0.61
KRT4P19013 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.83■□□□□ 0.61
KRT4P19013 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
KRT4P19013 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT4P19013 AC026185.1-201ENST00000445748 174 ntBASIC18.83■□□□□ 0.6
KRT4P19013 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT4P19013 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.83■□□□□ 0.6
KRT4P19013 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.83■□□□□ 0.6
KRT4P19013 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
KRT4P19013 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT4P19013 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
KRT4P19013 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
KRT4P19013 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
KRT4P19013 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
KRT4P19013 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.83■□□□□ 0.6
KRT4P19013 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.83■□□□□ 0.6
KRT4P19013 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 AC135776.1-201ENST00000319817 2481 ntBASIC18.82■□□□□ 0.6
KRT4P19013 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT4P19013 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KRT4P19013 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
KRT4P19013 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.82■□□□□ 0.6
KRT4P19013 PNMA6B-201ENST00000538162 1200 ntBASIC18.82■□□□□ 0.6
KRT4P19013 AL160286.2-201ENST00000567150 934 ntBASIC18.82■□□□□ 0.6
KRT4P19013 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.82■□□□□ 0.6
KRT4P19013 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.82■□□□□ 0.6
KRT4P19013 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KRT4P19013 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 RCC2P6-201ENST00000526625 1557 ntBASIC18.81■□□□□ 0.6
KRT4P19013 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT4P19013 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT4P19013 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT4P19013 CROCCP5-201ENST00000436658 830 ntBASIC18.81■□□□□ 0.6
KRT4P19013 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KRT4P19013 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT4P19013 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.81■□□□□ 0.6
KRT4P19013 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT4P19013 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.81■□□□□ 0.6
KRT4P19013 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 AC092437.1-201ENST00000624794 1048 ntBASIC18.81■□□□□ 0.6
KRT4P19013 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
KRT4P19013 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.81■□□□□ 0.6
KRT4P19013 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KRT4P19013 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT4P19013 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT4P19013 HTR7P1-202ENST00000624664 4411 ntBASIC18.8■□□□□ 0.6
KRT4P19013 MTMR9LP-203ENST00000426597 1545 ntBASIC18.8■□□□□ 0.6
KRT4P19013 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT4P19013 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT4P19013 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
KRT4P19013 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.8■□□□□ 0.6
KRT4P19013 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.8■□□□□ 0.6
KRT4P19013 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms