Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NELFEP18615 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.51■□□□□ 0.55
NELFEP18615 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
NELFEP18615 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.51■□□□□ 0.55
NELFEP18615 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.51■□□□□ 0.55
NELFEP18615 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.51■□□□□ 0.55
NELFEP18615 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NELFEP18615 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.5■□□□□ 0.55
NELFEP18615 AL032819.2-201ENST00000624543 2162 ntBASIC18.5■□□□□ 0.55
NELFEP18615 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 TERF1P1-201ENST00000311003 1181 ntBASIC18.5■□□□□ 0.55
NELFEP18615 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NELFEP18615 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.5■□□□□ 0.55
NELFEP18615 AL137013.1-201ENST00000432946 1228 ntBASIC18.5■□□□□ 0.55
NELFEP18615 MFAP1P1-201ENST00000442257 1255 ntBASIC18.5■□□□□ 0.55
NELFEP18615 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.5■□□□□ 0.55
NELFEP18615 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.5■□□□□ 0.55
NELFEP18615 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.5■□□□□ 0.55
NELFEP18615 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NELFEP18615 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NELFEP18615 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.5■□□□□ 0.55
NELFEP18615 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
NELFEP18615 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NELFEP18615 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NELFEP18615 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
NELFEP18615 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 AC009113.1-201ENST00000570267 2443 ntBASIC18.49■□□□□ 0.55
NELFEP18615 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.49■□□□□ 0.55
NELFEP18615 AC128688.1-201ENST00000487626 519 ntBASIC18.49■□□□□ 0.55
NELFEP18615 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.49■□□□□ 0.55
NELFEP18615 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NELFEP18615 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.49■□□□□ 0.55
NELFEP18615 LINC01465-201ENST00000408887 1940 ntBASIC18.49■□□□□ 0.55
NELFEP18615 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.49■□□□□ 0.55
NELFEP18615 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
NELFEP18615 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.48■□□□□ 0.55
NELFEP18615 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.48■□□□□ 0.55
NELFEP18615 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.48■□□□□ 0.55
NELFEP18615 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NELFEP18615 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 AC073508.3-201ENST00000619697 1419 ntBASIC18.48■□□□□ 0.55
NELFEP18615 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NELFEP18615 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.47■□□□□ 0.55
NELFEP18615 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.47■□□□□ 0.55
NELFEP18615 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NELFEP18615 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms