Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.85■□□□□ 0.77
PTPN1P18031 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN1P18031 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.85■□□□□ 0.77
PTPN1P18031 AC022616.7-201ENST00000525383 220 ntBASIC19.85■□□□□ 0.77
PTPN1P18031 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.85■□□□□ 0.77
PTPN1P18031 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PTPN1P18031 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.84■□□□□ 0.77
PTPN1P18031 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN1P18031 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PTPN1P18031 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PTPN1P18031 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PTPN1P18031 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN1P18031 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 NTF6B-201ENST00000591913 560 ntBASIC19.84■□□□□ 0.77
PTPN1P18031 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 AC024243.1-201ENST00000609234 778 ntBASIC19.84■□□□□ 0.77
PTPN1P18031 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN1P18031 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN1P18031 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PTPN1P18031 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
PTPN1P18031 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PTPN1P18031 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN1P18031 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 MTMR9LP-203ENST00000426597 1545 ntBASIC19.83■□□□□ 0.77
PTPN1P18031 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
PTPN1P18031 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
PTPN1P18031 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPN1P18031 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PTPN1P18031 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PTPN1P18031 FAM8A6P-201ENST00000407496 1135 ntBASIC19.83■□□□□ 0.77
PTPN1P18031 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN1P18031 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.83■□□□□ 0.77
PTPN1P18031 KRT18P35-201ENST00000510488 1269 ntBASIC19.83■□□□□ 0.77
PTPN1P18031 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN1P18031 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN1P18031 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN1P18031 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN1P18031 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PTPN1P18031 AL445228.2-201ENST00000605589 952 ntBASIC19.83■□□□□ 0.77
PTPN1P18031 AC112497.1-201ENST00000624824 639 ntBASIC19.83■□□□□ 0.77
PTPN1P18031 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PTPN1P18031 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN1P18031 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN1P18031 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 AL357033.4-201ENST00000617703 1807 ntBASIC19.83■□□□□ 0.76
PTPN1P18031 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN1P18031 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.83■□□□□ 0.76
PTPN1P18031 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN1P18031 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN1P18031 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN1P18031 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPN1P18031 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.82■□□□□ 0.76
PTPN1P18031 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.82■□□□□ 0.76
PTPN1P18031 AC092647.4-201ENST00000457211 535 ntBASIC19.82■□□□□ 0.76
PTPN1P18031 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN1P18031 LINC01238-205ENST00000567549 1107 ntBASIC19.82■□□□□ 0.76
PTPN1P18031 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN1P18031 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
PTPN1P18031 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms