Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.21■□□□□ 0.19
HLA-DQB1P01920 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
HLA-DQB1P01920 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.21■□□□□ 0.18
HLA-DQB1P01920 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.21■□□□□ 0.18
HLA-DQB1P01920 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.21■□□□□ 0.18
HLA-DQB1P01920 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
HLA-DQB1P01920 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
HLA-DQB1P01920 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 GPX1P1-201ENST00000388829 606 ntBASIC16.2■□□□□ 0.18
HLA-DQB1P01920 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 BID-214ENST00000617586 542 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HLA-DQB1P01920 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 PP12613-201ENST00000424958 2230 ntBASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AC022211.2-201ENST00000585075 2527 ntBASIC16.19■□□□□ 0.18
HLA-DQB1P01920 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AL512625.2-201ENST00000417533 625 ntBASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AC007322.1-201ENST00000426983 750 ntBASIC16.19■□□□□ 0.18
HLA-DQB1P01920 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 AC011676.5-201ENST00000624864 2660 ntBASIC16.19■□□□□ 0.18
HLA-DQB1P01920 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HLA-DQB1P01920 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB1P01920 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB1P01920 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DQB1P01920 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DQB1P01920 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms