Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZBED1O96006 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
ZBED1O96006 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.8■□□□□ 0.76
ZBED1O96006 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
ZBED1O96006 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 TERF1P1-201ENST00000311003 1181 ntBASIC19.8■□□□□ 0.76
ZBED1O96006 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.8■□□□□ 0.76
ZBED1O96006 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 AC010203.1-204ENST00000548782 407 ntBASIC19.8■□□□□ 0.76
ZBED1O96006 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.8■□□□□ 0.76
ZBED1O96006 MIR4674-201ENST00000582457 87 ntBASIC19.8■□□□□ 0.76
ZBED1O96006 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.8■□□□□ 0.76
ZBED1O96006 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZBED1O96006 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 AC093503.3-201ENST00000624917 2352 ntBASIC19.79■□□□□ 0.76
ZBED1O96006 AL512353.2-201ENST00000448759 1962 ntBASIC19.79■□□□□ 0.76
ZBED1O96006 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 GPAT2P1-201ENST00000444924 1672 ntBASIC19.79■□□□□ 0.76
ZBED1O96006 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.79■□□□□ 0.76
ZBED1O96006 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 RCN1P1-201ENST00000400413 996 ntBASIC19.79■□□□□ 0.76
ZBED1O96006 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.79■□□□□ 0.76
ZBED1O96006 LIN28AP1-201ENST00000429574 405 ntBASIC19.79■□□□□ 0.76
ZBED1O96006 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.79■□□□□ 0.76
ZBED1O96006 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.79■□□□□ 0.76
ZBED1O96006 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
ZBED1O96006 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.79■□□□□ 0.76
ZBED1O96006 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.79■□□□□ 0.76
ZBED1O96006 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZBED1O96006 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 AC073508.3-201ENST00000619697 1419 ntBASIC19.78■□□□□ 0.76
ZBED1O96006 HCG11-201ENST00000411553 5696 ntBASIC19.78■□□□□ 0.76
ZBED1O96006 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 AL023284.2-201ENST00000405850 579 ntBASIC19.78■□□□□ 0.76
ZBED1O96006 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ZBED1O96006 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ZBED1O96006 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZBED1O96006 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ZBED1O96006 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
ZBED1O96006 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.77■□□□□ 0.76
ZBED1O96006 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZBED1O96006 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.77■□□□□ 0.76
ZBED1O96006 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZBED1O96006 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.77■□□□□ 0.76
ZBED1O96006 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
ZBED1O96006 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZBED1O96006 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ZBED1O96006 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZBED1O96006 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZBED1O96006 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
ZBED1O96006 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.77■□□□□ 0.76
ZBED1O96006 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms