Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 MTMR9LP-203ENST00000426597 1545 ntBASIC18.96■□□□□ 0.63
CDH16O75309 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH16O75309 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.96■□□□□ 0.63
CDH16O75309 ID1-201ENST00000376105 1233 ntBASIC18.96■□□□□ 0.63
CDH16O75309 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.96■□□□□ 0.63
CDH16O75309 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 HTR7P1-202ENST00000624664 4411 ntBASIC18.96■□□□□ 0.63
CDH16O75309 RCC2P6-201ENST00000526625 1557 ntBASIC18.96■□□□□ 0.63
CDH16O75309 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDH16O75309 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
CDH16O75309 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDH16O75309 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 LINC00896-202ENST00000609602 2128 ntBASIC18.95■□□□□ 0.62
CDH16O75309 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CDH16O75309 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.95■□□□□ 0.62
CDH16O75309 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CDH16O75309 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 AC134043.2-201ENST00000624206 2238 ntBASIC18.95■□□□□ 0.62
CDH16O75309 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 SLC25A6P5-201ENST00000435663 894 ntBASIC18.95■□□□□ 0.62
CDH16O75309 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.95■□□□□ 0.62
CDH16O75309 AL160286.2-201ENST00000567150 934 ntBASIC18.95■□□□□ 0.62
CDH16O75309 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 MYC-208ENST00000641036 567 ntBASIC18.95■□□□□ 0.62
CDH16O75309 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.95■□□□□ 0.62
CDH16O75309 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH16O75309 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.95■□□□□ 0.62
CDH16O75309 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.95■□□□□ 0.62
CDH16O75309 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
CDH16O75309 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDH16O75309 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDH16O75309 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH16O75309 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH16O75309 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH16O75309 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.94■□□□□ 0.62
CDH16O75309 AL050303.2-201ENST00000619798 666 ntBASIC18.94■□□□□ 0.62
CDH16O75309 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.94■□□□□ 0.62
CDH16O75309 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDH16O75309 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDH16O75309 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CDH16O75309 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH16O75309 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.93■□□□□ 0.62
CDH16O75309 AC092368.3-202ENST00000574180 1591 ntBASIC18.93■□□□□ 0.62
CDH16O75309 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CDH16O75309 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDH16O75309 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH16O75309 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH16O75309 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 MIPEPP3-201ENST00000412105 444 ntBASIC18.93■□□□□ 0.62
CDH16O75309 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH16O75309 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.93■□□□□ 0.62
CDH16O75309 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH16O75309 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.93■□□□□ 0.62
CDH16O75309 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CDH16O75309 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDH16O75309 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms