Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.41■□□□□ 0.54
ITM2AO43736 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.41■□□□□ 0.54
ITM2AO43736 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.41■□□□□ 0.54
ITM2AO43736 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ITM2AO43736 C1QL1P1-201ENST00000568105 661 ntBASIC18.41■□□□□ 0.54
ITM2AO43736 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.41■□□□□ 0.54
ITM2AO43736 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.41■□□□□ 0.54
ITM2AO43736 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.41■□□□□ 0.54
ITM2AO43736 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.41■□□□□ 0.54
ITM2AO43736 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.41■□□□□ 0.54
ITM2AO43736 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ITM2AO43736 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.41■□□□□ 0.54
ITM2AO43736 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ITM2AO43736 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 NCF1B-203ENST00000435988 1254 ntBASIC18.4■□□□□ 0.54
ITM2AO43736 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.4■□□□□ 0.54
ITM2AO43736 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.4■□□□□ 0.54
ITM2AO43736 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.4■□□□□ 0.54
ITM2AO43736 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.4■□□□□ 0.54
ITM2AO43736 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ITM2AO43736 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.4■□□□□ 0.54
ITM2AO43736 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.4■□□□□ 0.54
ITM2AO43736 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ITM2AO43736 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ITM2AO43736 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ITM2AO43736 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.39■□□□□ 0.54
ITM2AO43736 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
ITM2AO43736 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
ITM2AO43736 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ITM2AO43736 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.39■□□□□ 0.53
ITM2AO43736 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 AC134043.2-201ENST00000624206 2238 ntBASIC18.39■□□□□ 0.53
ITM2AO43736 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ITM2AO43736 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.39■□□□□ 0.53
ITM2AO43736 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ITM2AO43736 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.38■□□□□ 0.53
ITM2AO43736 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.38■□□□□ 0.53
ITM2AO43736 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
ITM2AO43736 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ITM2AO43736 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.38■□□□□ 0.53
ITM2AO43736 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ITM2AO43736 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.38■□□□□ 0.53
ITM2AO43736 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.38■□□□□ 0.53
ITM2AO43736 AL138781.1-201ENST00000566567 1274 ntBASIC18.38■□□□□ 0.53
ITM2AO43736 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ITM2AO43736 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms