Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.06■□□□□ 0.64
RIPK2O43353 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.06■□□□□ 0.64
RIPK2O43353 AL162430.1-201ENST00000480705 870 ntBASIC19.06■□□□□ 0.64
RIPK2O43353 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 PNMA6B-201ENST00000538162 1200 ntBASIC19.06■□□□□ 0.64
RIPK2O43353 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.06■□□□□ 0.64
RIPK2O43353 AC138028.4-201ENST00000564984 1845 ntBASIC19.06■□□□□ 0.64
RIPK2O43353 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RIPK2O43353 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.06■□□□□ 0.64
RIPK2O43353 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.06■□□□□ 0.64
RIPK2O43353 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.06■□□□□ 0.64
RIPK2O43353 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RIPK2O43353 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RIPK2O43353 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 KRT8P41-201ENST00000533985 1514 ntBASIC19.05■□□□□ 0.64
RIPK2O43353 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.05■□□□□ 0.64
RIPK2O43353 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.05■□□□□ 0.64
RIPK2O43353 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.05■□□□□ 0.64
RIPK2O43353 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
RIPK2O43353 SLC25A6P5-201ENST00000435663 894 ntBASIC19.05■□□□□ 0.64
RIPK2O43353 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.05■□□□□ 0.64
RIPK2O43353 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.05■□□□□ 0.64
RIPK2O43353 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.05■□□□□ 0.64
RIPK2O43353 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.05■□□□□ 0.64
RIPK2O43353 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RIPK2O43353 AC022517.1-201ENST00000592429 346 ntBASIC19.05■□□□□ 0.64
RIPK2O43353 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.05■□□□□ 0.64
RIPK2O43353 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.05■□□□□ 0.64
RIPK2O43353 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RIPK2O43353 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RIPK2O43353 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.04■□□□□ 0.64
RIPK2O43353 MYC-208ENST00000641036 567 ntBASIC19.04■□□□□ 0.64
RIPK2O43353 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.04■□□□□ 0.64
RIPK2O43353 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RIPK2O43353 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RIPK2O43353 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.04■□□□□ 0.64
RIPK2O43353 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
RIPK2O43353 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RIPK2O43353 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms