Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.68■□□□□ 0.58
PHGDHO43175 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
PHGDHO43175 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 AC128676.1-201ENST00000454392 318 ntBASIC18.68■□□□□ 0.58
PHGDHO43175 AP002982.1-201ENST00000492365 877 ntBASIC18.68■□□□□ 0.58
PHGDHO43175 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.68■□□□□ 0.58
PHGDHO43175 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
PHGDHO43175 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 MTMR9LP-203ENST00000426597 1545 ntBASIC18.68■□□□□ 0.58
PHGDHO43175 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.68■□□□□ 0.58
PHGDHO43175 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PHGDHO43175 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.67■□□□□ 0.58
PHGDHO43175 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.67■□□□□ 0.58
PHGDHO43175 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.67■□□□□ 0.58
PHGDHO43175 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.67■□□□□ 0.58
PHGDHO43175 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHGDHO43175 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.67■□□□□ 0.58
PHGDHO43175 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.67■□□□□ 0.58
PHGDHO43175 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 AC091390.4-202ENST00000476426 537 ntBASIC18.66■□□□□ 0.58
PHGDHO43175 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHGDHO43175 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 C1QBPP2-201ENST00000528754 825 ntBASIC18.66■□□□□ 0.58
PHGDHO43175 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PHGDHO43175 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PHGDHO43175 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.66■□□□□ 0.58
PHGDHO43175 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PHGDHO43175 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.65■□□□□ 0.58
PHGDHO43175 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.65■□□□□ 0.58
PHGDHO43175 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AL133373.2-201ENST00000623187 2828 ntBASIC18.65■□□□□ 0.58
PHGDHO43175 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.65■□□□□ 0.58
PHGDHO43175 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AC005332.8-201ENST00000622750 2735 ntBASIC18.65■□□□□ 0.58
PHGDHO43175 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.65■□□□□ 0.58
PHGDHO43175 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHGDHO43175 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PHGDHO43175 AC068587.9-201ENST00000641814 219 ntBASIC18.65■□□□□ 0.58
PHGDHO43175 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms