Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 AC079598.2-202ENST00000546624 1451 ntBASIC14.39□□□□□ -0.11
NDUFA4O00483 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 MIR1238-201ENST00000408483 83 ntBASIC14.39□□□□□ -0.11
NDUFA4O00483 MCCD1P1-208ENST00000445732 328 ntBASIC14.39□□□□□ -0.11
NDUFA4O00483 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 GLDC-219ENST00000640208 420 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA4O00483 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
NDUFA4O00483 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA4O00483 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 SNAI3-AS1-205ENST00000568633 2096 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 AL020996.1-203ENST00000536896 2307 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFA4O00483 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 AC090340.1-201ENST00000620778 4980 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC14.38□□□□□ -0.11
NDUFA4O00483 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFA4O00483 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.38□□□□□ -0.11
NDUFA4O00483 AC093827.2-201ENST00000512654 315 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.38□□□□□ -0.11
NDUFA4O00483 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 AC008622.2-201ENST00000617006 1229 ntBASIC14.38□□□□□ -0.11
NDUFA4O00483 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NDUFA4O00483 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.38□□□□□ -0.11
NDUFA4O00483 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NDUFA4O00483 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFA4O00483 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.37□□□□□ -0.11
NDUFA4O00483 AL023284.2-201ENST00000405850 579 ntBASIC14.37□□□□□ -0.11
NDUFA4O00483 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFA4O00483 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFA4O00483 AC116562.4-202ENST00000641738 218 ntBASIC14.37□□□□□ -0.11
NDUFA4O00483 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.37□□□□□ -0.11
NDUFA4O00483 AC112777.1-201ENST00000540175 1423 ntBASIC14.37□□□□□ -0.11
NDUFA4O00483 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NDUFA4O00483 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC14.37□□□□□ -0.11
NDUFA4O00483 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NDUFA4O00483 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms