Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAV8-6A0A0B4J262 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TRAV8-6A0A0B4J262 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 AC133041.1-202ENST00000642053 222 ntBASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAV8-6A0A0B4J262 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 CICP6-201ENST00000457191 2729 ntBASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 DUSP5P2-201ENST00000426873 1033 ntBASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 CRK-204ENST00000574295 1391 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 BICD1-207ENST00000551848 1962 ntBASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAV8-6A0A0B4J262 KRT8P20-201ENST00000423953 1409 ntBASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
TRAV8-6A0A0B4J262 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms