Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 MFSD11-216ENST00000590393 1141 ntBASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 AC104187.1-201ENST00000607510 612 ntBASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
TRAV13-2A0A0B4J235 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 UNC93B3-201ENST00000308076 687 ntBASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 RARRES2P1-201ENST00000474487 481 ntBASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 AC023632.3-201ENST00000521633 145 ntBASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 GAS2L1P2-201ENST00000436355 1356 ntBASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
TRAV13-2A0A0B4J235 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 IRS3P-201ENST00000223076 1006 ntBASIC12.37□□□□□ -0.43
TRAV13-2A0A0B4J235 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms