Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KRT8P33-201ENST00000508125 1423 ntBASIC29.03■■■□□ 2.24
PTCH2Q9Y6C5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 AC010980.1-201ENST00000587192 1142 ntBASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 REST-210ENST00000638187 1334 ntTSL 5 BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.99■■■□□ 2.23
PTCH2Q9Y6C5 THA1P-201ENST00000590384 1145 ntBASIC28.99■■■□□ 2.23
PTCH2Q9Y6C5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.97■■■□□ 2.23
PTCH2Q9Y6C5 BHLHE23-202ENST00000612929 1109 ntBASIC28.97■■■□□ 2.23
PTCH2Q9Y6C5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
PTCH2Q9Y6C5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
PTCH2Q9Y6C5 DUX4L9-201ENST00000449051 1259 ntBASIC28.95■■■□□ 2.22
PTCH2Q9Y6C5 RP9P-202ENST00000450133 1212 ntBASIC28.95■■■□□ 2.22
PTCH2Q9Y6C5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
PTCH2Q9Y6C5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 AC026202.3-201ENST00000600805 1127 ntBASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 GUSBP5-201ENST00000418136 578 ntBASIC28.9■■■□□ 2.22
PTCH2Q9Y6C5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MIR935-201ENST00000401179 91 ntBASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 SMPD5-203ENST00000639008 1464 ntBASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCH2Q9Y6C5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCH2Q9Y6C5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 AC103834.1-201ENST00000520383 144 ntBASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 AC074183.2-201ENST00000623112 922 ntBASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 SPCS2P3-201ENST00000500401 656 ntBASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YBX1P4-201ENST00000392794 808 ntBASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 AC139795.1-202ENST00000500444 432 ntBASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms