Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 KRT8P33-201ENST00000508125 1423 ntBASIC29.03■■■□□ 2.24
PTCH2Q9Y6C5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
PTCH2Q9Y6C5 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 AC010980.1-201ENST00000587192 1142 ntBASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
PTCH2Q9Y6C5 REST-210ENST00000638187 1334 ntTSL 5 BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
PTCH2Q9Y6C5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.99■■■□□ 2.23
PTCH2Q9Y6C5 THA1P-201ENST00000590384 1145 ntBASIC28.99■■■□□ 2.23
PTCH2Q9Y6C5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
PTCH2Q9Y6C5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.97■■■□□ 2.23
PTCH2Q9Y6C5 BHLHE23-202ENST00000612929 1109 ntBASIC28.97■■■□□ 2.23
PTCH2Q9Y6C5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
PTCH2Q9Y6C5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
PTCH2Q9Y6C5 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.23
PTCH2Q9Y6C5 DUX4L9-201ENST00000449051 1259 ntBASIC28.95■■■□□ 2.22
PTCH2Q9Y6C5 RP9P-202ENST00000450133 1212 ntBASIC28.95■■■□□ 2.22
PTCH2Q9Y6C5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.94■■■□□ 2.22
PTCH2Q9Y6C5 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 HES6-204ENST00000409182 863 ntTSL 2 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.93■■■□□ 2.22
PTCH2Q9Y6C5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 AC026202.3-201ENST00000600805 1127 ntBASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC28.92■■■□□ 2.22
PTCH2Q9Y6C5 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
PTCH2Q9Y6C5 GUSBP5-201ENST00000418136 578 ntBASIC28.9■■■□□ 2.22
PTCH2Q9Y6C5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
PTCH2Q9Y6C5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MIR935-201ENST00000401179 91 ntBASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 SMPD5-203ENST00000639008 1464 ntBASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
PTCH2Q9Y6C5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCH2Q9Y6C5 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
PTCH2Q9Y6C5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 AC103834.1-201ENST00000520383 144 ntBASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 AC074183.2-201ENST00000623112 922 ntBASIC28.86■■■□□ 2.21
PTCH2Q9Y6C5 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 OR2A1-AS1-204ENST00000470435 602 ntBASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
PTCH2Q9Y6C5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 SPCS2P3-201ENST00000500401 656 ntBASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.83■■■□□ 2.21
PTCH2Q9Y6C5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 YBX1P4-201ENST00000392794 808 ntBASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
PTCH2Q9Y6C5 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
PTCH2Q9Y6C5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
PTCH2Q9Y6C5 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
PTCH2Q9Y6C5 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
PTCH2Q9Y6C5 AC139795.1-202ENST00000500444 432 ntBASIC28.78■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms