Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CLIC4Q9Y696 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.79■■■□□ 2.2
CLIC4Q9Y696 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CLIC4Q9Y696 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CLIC4Q9Y696 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
CLIC4Q9Y696 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC28.79■■■□□ 2.2
CLIC4Q9Y696 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 RPS2P35-201ENST00000443417 897 ntBASIC28.78■■■□□ 2.2
CLIC4Q9Y696 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.78■■■□□ 2.2
CLIC4Q9Y696 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CLIC4Q9Y696 DUX4L29-201ENST00000425409 679 ntBASIC28.76■■■□□ 2.19
CLIC4Q9Y696 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLIC4Q9Y696 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC28.76■■■□□ 2.19
CLIC4Q9Y696 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
CLIC4Q9Y696 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CLIC4Q9Y696 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.75■■■□□ 2.19
CLIC4Q9Y696 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
CLIC4Q9Y696 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CLIC4Q9Y696 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC28.74■■■□□ 2.19
CLIC4Q9Y696 AC110285.7-201ENST00000624417 1536 ntBASIC28.74■■■□□ 2.19
CLIC4Q9Y696 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
CLIC4Q9Y696 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC28.72■■■□□ 2.19
CLIC4Q9Y696 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
CLIC4Q9Y696 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.72■■■□□ 2.19
CLIC4Q9Y696 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
CLIC4Q9Y696 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.71■■■□□ 2.19
CLIC4Q9Y696 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.71■■■□□ 2.19
CLIC4Q9Y696 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
CLIC4Q9Y696 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.19
CLIC4Q9Y696 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.7■■■□□ 2.19
CLIC4Q9Y696 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
CLIC4Q9Y696 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
CLIC4Q9Y696 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC28.7■■■□□ 2.18
CLIC4Q9Y696 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
CLIC4Q9Y696 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.69■■■□□ 2.18
CLIC4Q9Y696 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
CLIC4Q9Y696 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.68■■■□□ 2.18
CLIC4Q9Y696 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.68■■■□□ 2.18
CLIC4Q9Y696 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
CLIC4Q9Y696 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.67■■■□□ 2.18
CLIC4Q9Y696 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.66■■■□□ 2.18
CLIC4Q9Y696 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
CLIC4Q9Y696 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
CLIC4Q9Y696 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLIC4Q9Y696 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLIC4Q9Y696 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
CLIC4Q9Y696 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CLIC4Q9Y696 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
CLIC4Q9Y696 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC28.64■■■□□ 2.18
CLIC4Q9Y696 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
CLIC4Q9Y696 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.64■■■□□ 2.18
CLIC4Q9Y696 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CLIC4Q9Y696 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.17
CLIC4Q9Y696 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
CLIC4Q9Y696 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
CLIC4Q9Y696 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
CLIC4Q9Y696 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
CLIC4Q9Y696 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.62■■■□□ 2.17
CLIC4Q9Y696 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.62■■■□□ 2.17
CLIC4Q9Y696 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
CLIC4Q9Y696 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.61■■■□□ 2.17
CLIC4Q9Y696 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
CLIC4Q9Y696 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
CLIC4Q9Y696 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
CLIC4Q9Y696 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
CLIC4Q9Y696 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
CLIC4Q9Y696 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.59■■■□□ 2.17
CLIC4Q9Y696 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CLIC4Q9Y696 CREM-210ENST00000374721 2020 ntTSL 5 BASIC28.58■■■□□ 2.17
CLIC4Q9Y696 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.58■■■□□ 2.17
CLIC4Q9Y696 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CLIC4Q9Y696 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
CLIC4Q9Y696 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CLIC4Q9Y696 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
CLIC4Q9Y696 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CLIC4Q9Y696 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
CLIC4Q9Y696 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CLIC4Q9Y696 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.56■■■□□ 2.16
CLIC4Q9Y696 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.56■■■□□ 2.16
CLIC4Q9Y696 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC28.56■■■□□ 2.16
CLIC4Q9Y696 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
CLIC4Q9Y696 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CLIC4Q9Y696 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CLIC4Q9Y696 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
CLIC4Q9Y696 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.54■■■□□ 2.16
CLIC4Q9Y696 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.54■■■□□ 2.16
CLIC4Q9Y696 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
CLIC4Q9Y696 AL449106.1-201ENST00000608517 1980 ntBASIC28.53■■■□□ 2.16
CLIC4Q9Y696 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC28.53■■■□□ 2.16
CLIC4Q9Y696 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms