Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA11Q9Y5H2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.32■■□□□ 1.48
PCDHGA11Q9Y5H2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
PCDHGA11Q9Y5H2 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA11Q9Y5H2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
PCDHGA11Q9Y5H2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
PCDHGA11Q9Y5H2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.29■■□□□ 1.48
PCDHGA11Q9Y5H2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
PCDHGA11Q9Y5H2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 AC110285.7-201ENST00000624417 1536 ntBASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
PCDHGA11Q9Y5H2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.27■■□□□ 1.48
PCDHGA11Q9Y5H2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA11Q9Y5H2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA11Q9Y5H2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA11Q9Y5H2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA11Q9Y5H2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGA11Q9Y5H2 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
PCDHGA11Q9Y5H2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
PCDHGA11Q9Y5H2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.24■■□□□ 1.47
PCDHGA11Q9Y5H2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA11Q9Y5H2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGA11Q9Y5H2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 LINC01971-201ENST00000617888 1048 ntBASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 AC135731.1-201ENST00000569415 2548 ntBASIC24.23■■□□□ 1.47
PCDHGA11Q9Y5H2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
PCDHGA11Q9Y5H2 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.22■■□□□ 1.47
PCDHGA11Q9Y5H2 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGA11Q9Y5H2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.2■■□□□ 1.47
PCDHGA11Q9Y5H2 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGA11Q9Y5H2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA11Q9Y5H2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGA11Q9Y5H2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
PCDHGA11Q9Y5H2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA11Q9Y5H2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA11Q9Y5H2 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA11Q9Y5H2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGA11Q9Y5H2 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
PCDHGA11Q9Y5H2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGA11Q9Y5H2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PCDHGA11Q9Y5H2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGA11Q9Y5H2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA11Q9Y5H2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGA11Q9Y5H2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDHGA11Q9Y5H2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHGA11Q9Y5H2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGA11Q9Y5H2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGA11Q9Y5H2 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGA11Q9Y5H2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.14■■□□□ 1.45
PCDHGA11Q9Y5H2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA11Q9Y5H2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA11Q9Y5H2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHGA11Q9Y5H2 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA11Q9Y5H2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHGA11Q9Y5H2 ZNRF2P2-203ENST00000454624 420 ntBASIC24.12■■□□□ 1.45
PCDHGA11Q9Y5H2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA11Q9Y5H2 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHGA11Q9Y5H2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms