Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
NCKAP1Q9Y2A7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
NCKAP1Q9Y2A7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.33■■□□□ 1.64
NCKAP1Q9Y2A7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 AC092296.2-201ENST00000589470 999 ntBASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.32■■□□□ 1.64
NCKAP1Q9Y2A7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCKAP1Q9Y2A7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.31■■□□□ 1.64
NCKAP1Q9Y2A7 ECEL1P2-201ENST00000461596 1295 ntBASIC25.31■■□□□ 1.64
NCKAP1Q9Y2A7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
NCKAP1Q9Y2A7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
NCKAP1Q9Y2A7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
NCKAP1Q9Y2A7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 AC012354.3-201ENST00000623734 483 ntBASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.29■■□□□ 1.64
NCKAP1Q9Y2A7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
NCKAP1Q9Y2A7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.27■■□□□ 1.64
NCKAP1Q9Y2A7 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
NCKAP1Q9Y2A7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCKAP1Q9Y2A7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.25■■□□□ 1.63
NCKAP1Q9Y2A7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
NCKAP1Q9Y2A7 AL139393.2-201ENST00000608721 2025 ntBASIC25.25■■□□□ 1.63
NCKAP1Q9Y2A7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.23■■□□□ 1.63
NCKAP1Q9Y2A7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC25.23■■□□□ 1.63
NCKAP1Q9Y2A7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.23■■□□□ 1.63
NCKAP1Q9Y2A7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.23■■□□□ 1.63
NCKAP1Q9Y2A7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 U85056.1-201ENST00000616429 682 ntBASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
NCKAP1Q9Y2A7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.21■■□□□ 1.63
NCKAP1Q9Y2A7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
NCKAP1Q9Y2A7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
NCKAP1Q9Y2A7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
NCKAP1Q9Y2A7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.2■■□□□ 1.62
NCKAP1Q9Y2A7 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.2■■□□□ 1.62
NCKAP1Q9Y2A7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 ABCB10P3-201ENST00000561950 2166 ntBASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NCKAP1Q9Y2A7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
NCKAP1Q9Y2A7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NCKAP1Q9Y2A7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NCKAP1Q9Y2A7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.18■■□□□ 1.62
NCKAP1Q9Y2A7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 AL359258.2-201ENST00000564063 1566 ntBASIC25.17■■□□□ 1.62
NCKAP1Q9Y2A7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
NCKAP1Q9Y2A7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.16■■□□□ 1.62
NCKAP1Q9Y2A7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.16■■□□□ 1.62
NCKAP1Q9Y2A7 AL157400.5-201ENST00000507624 621 ntBASIC25.15■■□□□ 1.62
NCKAP1Q9Y2A7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
NCKAP1Q9Y2A7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.15■■□□□ 1.62
NCKAP1Q9Y2A7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.15■■□□□ 1.62
NCKAP1Q9Y2A7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NCKAP1Q9Y2A7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NCKAP1Q9Y2A7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.61
NCKAP1Q9Y2A7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
NCKAP1Q9Y2A7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
NCKAP1Q9Y2A7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
NCKAP1Q9Y2A7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NCKAP1Q9Y2A7 AP002414.2-202ENST00000590929 1450 ntBASIC25.13■■□□□ 1.61
NCKAP1Q9Y2A7 AC018358.1-201ENST00000631079 1402 ntBASIC25.12■■□□□ 1.61
NCKAP1Q9Y2A7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NCKAP1Q9Y2A7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.12■■□□□ 1.61
NCKAP1Q9Y2A7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.11■■□□□ 1.61
NCKAP1Q9Y2A7 AL033527.3-201ENST00000566366 1196 ntBASIC25.11■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms