Protein–RNA interactions for Protein: Q9UQL6

HDAC5, Histone deacetylase 5, humanhuman

Predictions only

Length 1,122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5Q9UQL6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
HDAC5Q9UQL6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.65
HDAC5Q9UQL6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.65
HDAC5Q9UQL6 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
HDAC5Q9UQL6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
HDAC5Q9UQL6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HDAC5Q9UQL6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
HDAC5Q9UQL6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
HDAC5Q9UQL6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
HDAC5Q9UQL6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 MIR219A2-201ENST00000608502 1504 ntBASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
HDAC5Q9UQL6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
HDAC5Q9UQL6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.53■■■□□ 2.64
HDAC5Q9UQL6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HDAC5Q9UQL6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
HDAC5Q9UQL6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
HDAC5Q9UQL6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC31.5■■■□□ 2.63
HDAC5Q9UQL6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.5■■■□□ 2.63
HDAC5Q9UQL6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC31.49■■■□□ 2.63
HDAC5Q9UQL6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC31.48■■■□□ 2.63
HDAC5Q9UQL6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
HDAC5Q9UQL6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.48■■■□□ 2.63
HDAC5Q9UQL6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.48■■■□□ 2.63
HDAC5Q9UQL6 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
HDAC5Q9UQL6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HDAC5Q9UQL6 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HDAC5Q9UQL6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HDAC5Q9UQL6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
HDAC5Q9UQL6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
HDAC5Q9UQL6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
HDAC5Q9UQL6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
HDAC5Q9UQL6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
HDAC5Q9UQL6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.46■■■□□ 2.63
HDAC5Q9UQL6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
HDAC5Q9UQL6 AC142086.6-201ENST00000621154 1765 ntBASIC31.44■■■□□ 2.62
HDAC5Q9UQL6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
HDAC5Q9UQL6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
HDAC5Q9UQL6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
HDAC5Q9UQL6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.43■■■□□ 2.62
HDAC5Q9UQL6 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.43■■■□□ 2.62
HDAC5Q9UQL6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC31.42■■■□□ 2.62
HDAC5Q9UQL6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
HDAC5Q9UQL6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
HDAC5Q9UQL6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC31.42■■■□□ 2.62
HDAC5Q9UQL6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
HDAC5Q9UQL6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
HDAC5Q9UQL6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
HDAC5Q9UQL6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
HDAC5Q9UQL6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 AC126177.7-201ENST00000547904 679 ntBASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
HDAC5Q9UQL6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
HDAC5Q9UQL6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC31.39■■■□□ 2.62
HDAC5Q9UQL6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC31.39■■■□□ 2.62
HDAC5Q9UQL6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
HDAC5Q9UQL6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.61
HDAC5Q9UQL6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
HDAC5Q9UQL6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC31.38■■■□□ 2.61
HDAC5Q9UQL6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
HDAC5Q9UQL6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
HDAC5Q9UQL6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.36■■■□□ 2.61
HDAC5Q9UQL6 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.36■■■□□ 2.61
HDAC5Q9UQL6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
HDAC5Q9UQL6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
HDAC5Q9UQL6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
HDAC5Q9UQL6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
HDAC5Q9UQL6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
HDAC5Q9UQL6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC31.35■■■□□ 2.61
HDAC5Q9UQL6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
HDAC5Q9UQL6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
HDAC5Q9UQL6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.34■■■□□ 2.61
HDAC5Q9UQL6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
HDAC5Q9UQL6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
HDAC5Q9UQL6 LINC01003-201ENST00000564834 1764 ntBASIC31.34■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms