Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PCDHGC3Q9UN70 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
PCDHGC3Q9UN70 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGC3Q9UN70 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHGC3Q9UN70 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.72■■□□□ 1.87
PCDHGC3Q9UN70 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.72■■□□□ 1.87
PCDHGC3Q9UN70 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHGC3Q9UN70 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
PCDHGC3Q9UN70 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.87
PCDHGC3Q9UN70 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGC3Q9UN70 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.7■■□□□ 1.86
PCDHGC3Q9UN70 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC26.7■■□□□ 1.86
PCDHGC3Q9UN70 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
PCDHGC3Q9UN70 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PCDHGC3Q9UN70 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGC3Q9UN70 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGC3Q9UN70 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGC3Q9UN70 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGC3Q9UN70 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHGC3Q9UN70 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHGC3Q9UN70 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.67■■□□□ 1.86
PCDHGC3Q9UN70 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHGC3Q9UN70 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 CR559946.2-201ENST00000623684 991 ntBASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHGC3Q9UN70 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGC3Q9UN70 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
PCDHGC3Q9UN70 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHGC3Q9UN70 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGC3Q9UN70 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGC3Q9UN70 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHGC3Q9UN70 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PCDHGC3Q9UN70 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 AC008813.1-201ENST00000536597 885 ntBASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 MIR3648-2-201ENST00000581792 180 ntBASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 MIR3648-1-201ENST00000615959 180 ntBASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.62■■□□□ 1.85
PCDHGC3Q9UN70 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
PCDHGC3Q9UN70 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHGC3Q9UN70 MIR7108-201ENST00000614319 87 ntBASIC26.61■■□□□ 1.85
PCDHGC3Q9UN70 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.61■■□□□ 1.85
PCDHGC3Q9UN70 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.6■■□□□ 1.85
PCDHGC3Q9UN70 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
PCDHGC3Q9UN70 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGC3Q9UN70 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGC3Q9UN70 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHGC3Q9UN70 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHGC3Q9UN70 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGC3Q9UN70 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHGC3Q9UN70 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
PCDHGC3Q9UN70 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHGC3Q9UN70 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGC3Q9UN70 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.56■■□□□ 1.84
PCDHGC3Q9UN70 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGC3Q9UN70 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHGC3Q9UN70 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.56■■□□□ 1.84
PCDHGC3Q9UN70 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
PCDHGC3Q9UN70 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
PCDHGC3Q9UN70 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PCDHGC3Q9UN70 AL121749.1-202ENST00000609313 2153 ntBASIC26.54■■□□□ 1.84
PCDHGC3Q9UN70 AC148477.6-201ENST00000623746 465 ntBASIC26.54■■□□□ 1.84
PCDHGC3Q9UN70 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
PCDHGC3Q9UN70 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.53■■□□□ 1.84
PCDHGC3Q9UN70 AC016575.1-201ENST00000607026 382 ntBASIC26.53■■□□□ 1.84
PCDHGC3Q9UN70 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
PCDHGC3Q9UN70 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.53■■□□□ 1.84
PCDHGC3Q9UN70 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGC3Q9UN70 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHGC3Q9UN70 HLA-V-202ENST00000446817 847 ntBASIC26.52■■□□□ 1.84
PCDHGC3Q9UN70 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
PCDHGC3Q9UN70 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
PCDHGC3Q9UN70 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC3Q9UN70 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PCDHGC3Q9UN70 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGC3Q9UN70 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
PCDHGC3Q9UN70 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGC3Q9UN70 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PCDHGC3Q9UN70 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.49■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms