Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF7Q9UBF6 HLA-V-202ENST00000446817 847 ntBASIC21.29■■□□□ 1
RNF7Q9UBF6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.29■■□□□ 1
RNF7Q9UBF6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF7Q9UBF6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF7Q9UBF6 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RNF7Q9UBF6 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF7Q9UBF6 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.28■■□□□ 1
RNF7Q9UBF6 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.28■■□□□ 1
RNF7Q9UBF6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.28■■□□□ 1
RNF7Q9UBF6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RNF7Q9UBF6 MIR639-201ENST00000384974 98 ntBASIC21.27■■□□□ 1
RNF7Q9UBF6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RNF7Q9UBF6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RNF7Q9UBF6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RNF7Q9UBF6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RNF7Q9UBF6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
RNF7Q9UBF6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.26■□□□□ 0.99
RNF7Q9UBF6 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
RNF7Q9UBF6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.25■□□□□ 0.99
RNF7Q9UBF6 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.25■□□□□ 0.99
RNF7Q9UBF6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF7Q9UBF6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RNF7Q9UBF6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF7Q9UBF6 AC018358.1-201ENST00000631079 1402 ntBASIC21.23■□□□□ 0.99
RNF7Q9UBF6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
RNF7Q9UBF6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF7Q9UBF6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RNF7Q9UBF6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF7Q9UBF6 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF7Q9UBF6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF7Q9UBF6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF7Q9UBF6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.21■□□□□ 0.99
RNF7Q9UBF6 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF7Q9UBF6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF7Q9UBF6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF7Q9UBF6 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF7Q9UBF6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF7Q9UBF6 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF7Q9UBF6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
RNF7Q9UBF6 AC148477.6-201ENST00000623746 465 ntBASIC21.19■□□□□ 0.98
RNF7Q9UBF6 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF7Q9UBF6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
RNF7Q9UBF6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.18■□□□□ 0.98
RNF7Q9UBF6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RNF7Q9UBF6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RNF7Q9UBF6 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RNF7Q9UBF6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RNF7Q9UBF6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF7Q9UBF6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF7Q9UBF6 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
RNF7Q9UBF6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF7Q9UBF6 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
RNF7Q9UBF6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RNF7Q9UBF6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RNF7Q9UBF6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
RNF7Q9UBF6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF7Q9UBF6 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.15■□□□□ 0.98
RNF7Q9UBF6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RNF7Q9UBF6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
RNF7Q9UBF6 LINC01003-201ENST00000564834 1764 ntBASIC21.15■□□□□ 0.98
RNF7Q9UBF6 MIR219A2-201ENST00000608502 1504 ntBASIC21.14■□□□□ 0.98
RNF7Q9UBF6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
RNF7Q9UBF6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
RNF7Q9UBF6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
RNF7Q9UBF6 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.13■□□□□ 0.97
RNF7Q9UBF6 MIR4449-201ENST00000578365 66 ntBASIC21.13■□□□□ 0.97
RNF7Q9UBF6 BX255925.1-201ENST00000566954 1854 ntBASIC21.13■□□□□ 0.97
RNF7Q9UBF6 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
RNF7Q9UBF6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
RNF7Q9UBF6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
RNF7Q9UBF6 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RNF7Q9UBF6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
RNF7Q9UBF6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.1■□□□□ 0.97
RNF7Q9UBF6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RNF7Q9UBF6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
RNF7Q9UBF6 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms