Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LRIT1Q9P2V4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 AC092296.2-201ENST00000589470 999 ntBASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 AL139393.2-201ENST00000608721 2025 ntBASIC24.48■■□□□ 1.51
LRIT1Q9P2V4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.47■■□□□ 1.51
LRIT1Q9P2V4 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.46■■□□□ 1.51
LRIT1Q9P2V4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC24.45■■□□□ 1.51
LRIT1Q9P2V4 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.45■■□□□ 1.5
LRIT1Q9P2V4 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LRIT1Q9P2V4 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 ECEL1P2-201ENST00000461596 1295 ntBASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.44■■□□□ 1.5
LRIT1Q9P2V4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.43■■□□□ 1.5
LRIT1Q9P2V4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
LRIT1Q9P2V4 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 ABCB10P3-201ENST00000561950 2166 ntBASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 AC012354.3-201ENST00000623734 483 ntBASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
LRIT1Q9P2V4 U85056.1-201ENST00000616429 682 ntBASIC24.41■■□□□ 1.5
LRIT1Q9P2V4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRIT1Q9P2V4 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
LRIT1Q9P2V4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
LRIT1Q9P2V4 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.38■■□□□ 1.49
LRIT1Q9P2V4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 MOB2-207ENST00000614710 705 ntTSL 5 BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRIT1Q9P2V4 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.36■■□□□ 1.49
LRIT1Q9P2V4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRIT1Q9P2V4 AL157400.5-201ENST00000507624 621 ntBASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.34■■□□□ 1.49
LRIT1Q9P2V4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LRIT1Q9P2V4 AL359258.2-201ENST00000564063 1566 ntBASIC24.33■■□□□ 1.48
LRIT1Q9P2V4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
LRIT1Q9P2V4 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 AC018358.1-201ENST00000631079 1402 ntBASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LRIT1Q9P2V4 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRIT1Q9P2V4 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
LRIT1Q9P2V4 AL033527.3-201ENST00000566366 1196 ntBASIC24.29■■□□□ 1.48
LRIT1Q9P2V4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms