Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC22.68■■□□□ 1.22
NPAP1Q9NZP6 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.67■■□□□ 1.22
NPAP1Q9NZP6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPAP1Q9NZP6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPAP1Q9NZP6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
NPAP1Q9NZP6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NPAP1Q9NZP6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC22.66■■□□□ 1.22
NPAP1Q9NZP6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
NPAP1Q9NZP6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.66■■□□□ 1.22
NPAP1Q9NZP6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPAP1Q9NZP6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
NPAP1Q9NZP6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NPAP1Q9NZP6 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
NPAP1Q9NZP6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.65■■□□□ 1.22
NPAP1Q9NZP6 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
NPAP1Q9NZP6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.64■■□□□ 1.22
NPAP1Q9NZP6 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
NPAP1Q9NZP6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NPAP1Q9NZP6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
NPAP1Q9NZP6 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.63■■□□□ 1.21
NPAP1Q9NZP6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.63■■□□□ 1.21
NPAP1Q9NZP6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 AC127502.1-201ENST00000399971 1502 ntBASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 MIR3648-2-201ENST00000581792 180 ntBASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 MIR3648-1-201ENST00000615959 180 ntBASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 CR559946.2-201ENST00000623684 991 ntBASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
NPAP1Q9NZP6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
NPAP1Q9NZP6 LINC00273-201ENST00000539813 1452 ntBASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 AC016575.1-201ENST00000607026 382 ntBASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
NPAP1Q9NZP6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
NPAP1Q9NZP6 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.59■■□□□ 1.21
NPAP1Q9NZP6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPAP1Q9NZP6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
NPAP1Q9NZP6 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.58■■□□□ 1.21
NPAP1Q9NZP6 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.58■■□□□ 1.21
NPAP1Q9NZP6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.58■■□□□ 1.21
NPAP1Q9NZP6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
NPAP1Q9NZP6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
NPAP1Q9NZP6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
NPAP1Q9NZP6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPAP1Q9NZP6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.56■■□□□ 1.2
NPAP1Q9NZP6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
NPAP1Q9NZP6 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
NPAP1Q9NZP6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L13-201ENST00000554103 1267 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L15-201ENST00000611059 1267 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L23-201ENST00000615195 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L24-201ENST00000617576 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L22-201ENST00000618238 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L20-201ENST00000619712 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L21-201ENST00000622058 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L10-201ENST00000622460 1267 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 DUX4L25-201ENST00000624915 1269 ntBASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NPAP1Q9NZP6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 MIR639-201ENST00000384974 98 ntBASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
NPAP1Q9NZP6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPAP1Q9NZP6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPAP1Q9NZP6 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPAP1Q9NZP6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NPAP1Q9NZP6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NPAP1Q9NZP6 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
NPAP1Q9NZP6 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.52■■□□□ 1.2
NPAP1Q9NZP6 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms