Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
ECHDC1Q9NTX5 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
ECHDC1Q9NTX5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ECHDC1Q9NTX5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
ECHDC1Q9NTX5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
ECHDC1Q9NTX5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
ECHDC1Q9NTX5 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
ECHDC1Q9NTX5 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.85■■■□□ 2.53
ECHDC1Q9NTX5 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
ECHDC1Q9NTX5 LINC01003-201ENST00000564834 1764 ntBASIC30.84■■■□□ 2.53
ECHDC1Q9NTX5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.84■■■□□ 2.53
ECHDC1Q9NTX5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
ECHDC1Q9NTX5 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ECHDC1Q9NTX5 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
ECHDC1Q9NTX5 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.83■■■□□ 2.53
ECHDC1Q9NTX5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
ECHDC1Q9NTX5 BX255925.1-201ENST00000566954 1854 ntBASIC30.82■■■□□ 2.53
ECHDC1Q9NTX5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC30.82■■■□□ 2.52
ECHDC1Q9NTX5 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.82■■■□□ 2.52
ECHDC1Q9NTX5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ECHDC1Q9NTX5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ECHDC1Q9NTX5 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ECHDC1Q9NTX5 AC008813.1-201ENST00000536597 885 ntBASIC30.81■■■□□ 2.52
ECHDC1Q9NTX5 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
ECHDC1Q9NTX5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
ECHDC1Q9NTX5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ECHDC1Q9NTX5 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
ECHDC1Q9NTX5 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
ECHDC1Q9NTX5 HLA-V-202ENST00000446817 847 ntBASIC30.77■■■□□ 2.52
ECHDC1Q9NTX5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.77■■■□□ 2.52
ECHDC1Q9NTX5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.76■■■□□ 2.52
ECHDC1Q9NTX5 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC30.76■■■□□ 2.52
ECHDC1Q9NTX5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC30.76■■■□□ 2.51
ECHDC1Q9NTX5 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ECHDC1Q9NTX5 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC30.76■■■□□ 2.51
ECHDC1Q9NTX5 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ECHDC1Q9NTX5 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 MIR639-201ENST00000384974 98 ntBASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
ECHDC1Q9NTX5 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
ECHDC1Q9NTX5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
ECHDC1Q9NTX5 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ECHDC1Q9NTX5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ECHDC1Q9NTX5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.71■■■□□ 2.51
ECHDC1Q9NTX5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ECHDC1Q9NTX5 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.7■■■□□ 2.51
ECHDC1Q9NTX5 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
ECHDC1Q9NTX5 AC148477.6-201ENST00000623746 465 ntBASIC30.7■■■□□ 2.51
ECHDC1Q9NTX5 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
ECHDC1Q9NTX5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
ECHDC1Q9NTX5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
ECHDC1Q9NTX5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ECHDC1Q9NTX5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.68■■■□□ 2.5
ECHDC1Q9NTX5 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC30.68■■■□□ 2.5
ECHDC1Q9NTX5 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ECHDC1Q9NTX5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ECHDC1Q9NTX5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
ECHDC1Q9NTX5 MBP-237ENST00000579129 1052 ntTSL 5 BASIC30.66■■■□□ 2.5
ECHDC1Q9NTX5 MIR219A2-201ENST00000608502 1504 ntBASIC30.66■■■□□ 2.5
ECHDC1Q9NTX5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ECHDC1Q9NTX5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ECHDC1Q9NTX5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ECHDC1Q9NTX5 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.64■■■□□ 2.5
ECHDC1Q9NTX5 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
ECHDC1Q9NTX5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
ECHDC1Q9NTX5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
ECHDC1Q9NTX5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
ECHDC1Q9NTX5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ECHDC1Q9NTX5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
ECHDC1Q9NTX5 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ECHDC1Q9NTX5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ECHDC1Q9NTX5 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ECHDC1Q9NTX5 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ECHDC1Q9NTX5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.61■■■□□ 2.49
ECHDC1Q9NTX5 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.6■■■□□ 2.49
ECHDC1Q9NTX5 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.6■■■□□ 2.49
ECHDC1Q9NTX5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ECHDC1Q9NTX5 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
ECHDC1Q9NTX5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ECHDC1Q9NTX5 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.58■■■□□ 2.49
ECHDC1Q9NTX5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
ECHDC1Q9NTX5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC30.58■■■□□ 2.49
ECHDC1Q9NTX5 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.58■■■□□ 2.49
ECHDC1Q9NTX5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.57■■■□□ 2.48
ECHDC1Q9NTX5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.56■■■□□ 2.48
ECHDC1Q9NTX5 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms