Protein–RNA interactions for Protein: Q9NP90

RAB9B, Ras-related protein Rab-9B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9BQ9NP90 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB9BQ9NP90 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB9BQ9NP90 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
RAB9BQ9NP90 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB9BQ9NP90 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB9BQ9NP90 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB9BQ9NP90 AC110285.7-201ENST00000624417 1536 ntBASIC20.78■□□□□ 0.92
RAB9BQ9NP90 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
RAB9BQ9NP90 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB9BQ9NP90 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.77■□□□□ 0.92
RAB9BQ9NP90 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB9BQ9NP90 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB9BQ9NP90 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB9BQ9NP90 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
RAB9BQ9NP90 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 RPS2P35-201ENST00000443417 897 ntBASIC20.74■□□□□ 0.91
RAB9BQ9NP90 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAB9BQ9NP90 AL121749.1-202ENST00000609313 2153 ntBASIC20.73■□□□□ 0.91
RAB9BQ9NP90 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB9BQ9NP90 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB9BQ9NP90 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB9BQ9NP90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.73■□□□□ 0.91
RAB9BQ9NP90 LINC01971-201ENST00000617888 1048 ntBASIC20.73■□□□□ 0.91
RAB9BQ9NP90 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAB9BQ9NP90 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
RAB9BQ9NP90 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
RAB9BQ9NP90 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAB9BQ9NP90 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAB9BQ9NP90 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RAB9BQ9NP90 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAB9BQ9NP90 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB9BQ9NP90 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
RAB9BQ9NP90 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.7■□□□□ 0.9
RAB9BQ9NP90 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RAB9BQ9NP90 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAB9BQ9NP90 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
RAB9BQ9NP90 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAB9BQ9NP90 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAB9BQ9NP90 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAB9BQ9NP90 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.66■□□□□ 0.9
RAB9BQ9NP90 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.66■□□□□ 0.9
RAB9BQ9NP90 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAB9BQ9NP90 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB9BQ9NP90 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
RAB9BQ9NP90 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RAB9BQ9NP90 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RAB9BQ9NP90 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.64■□□□□ 0.89
RAB9BQ9NP90 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RAB9BQ9NP90 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms