Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC25.87■■□□□ 1.73
ATP13A1Q9HD20 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
ATP13A1Q9HD20 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
ATP13A1Q9HD20 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.85■■□□□ 1.73
ATP13A1Q9HD20 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC25.85■■□□□ 1.73
ATP13A1Q9HD20 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP13A1Q9HD20 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
ATP13A1Q9HD20 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP13A1Q9HD20 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP13A1Q9HD20 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
ATP13A1Q9HD20 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.83■■□□□ 1.73
ATP13A1Q9HD20 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.83■■□□□ 1.73
ATP13A1Q9HD20 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
ATP13A1Q9HD20 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.83■■□□□ 1.73
ATP13A1Q9HD20 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
ATP13A1Q9HD20 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
ATP13A1Q9HD20 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.72
ATP13A1Q9HD20 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.82■■□□□ 1.72
ATP13A1Q9HD20 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
ATP13A1Q9HD20 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
ATP13A1Q9HD20 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
ATP13A1Q9HD20 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
ATP13A1Q9HD20 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
ATP13A1Q9HD20 AC148477.6-201ENST00000623746 465 ntBASIC25.79■■□□□ 1.72
ATP13A1Q9HD20 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
ATP13A1Q9HD20 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATP13A1Q9HD20 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
ATP13A1Q9HD20 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
ATP13A1Q9HD20 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
ATP13A1Q9HD20 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
ATP13A1Q9HD20 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.76■■□□□ 1.71
ATP13A1Q9HD20 MIR219A2-201ENST00000608502 1504 ntBASIC25.76■■□□□ 1.71
ATP13A1Q9HD20 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
ATP13A1Q9HD20 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
ATP13A1Q9HD20 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
ATP13A1Q9HD20 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
ATP13A1Q9HD20 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
ATP13A1Q9HD20 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
ATP13A1Q9HD20 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP13A1Q9HD20 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
ATP13A1Q9HD20 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.73■■□□□ 1.71
ATP13A1Q9HD20 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
ATP13A1Q9HD20 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ATP13A1Q9HD20 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ATP13A1Q9HD20 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ATP13A1Q9HD20 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.71■■□□□ 1.71
ATP13A1Q9HD20 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ATP13A1Q9HD20 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.71■■□□□ 1.71
ATP13A1Q9HD20 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.71■■□□□ 1.71
ATP13A1Q9HD20 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.71■■□□□ 1.71
ATP13A1Q9HD20 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.7■■□□□ 1.7
ATP13A1Q9HD20 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ATP13A1Q9HD20 AC018358.1-201ENST00000631079 1402 ntBASIC25.7■■□□□ 1.7
ATP13A1Q9HD20 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.7■■□□□ 1.7
ATP13A1Q9HD20 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.69■■□□□ 1.7
ATP13A1Q9HD20 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ATP13A1Q9HD20 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.67■■□□□ 1.7
ATP13A1Q9HD20 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ATP13A1Q9HD20 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ATP13A1Q9HD20 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms