Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.27■■□□□ 1.64
MRM3Q9HC36 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRM3Q9HC36 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
MRM3Q9HC36 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
MRM3Q9HC36 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
MRM3Q9HC36 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
MRM3Q9HC36 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
MRM3Q9HC36 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.24■■□□□ 1.63
MRM3Q9HC36 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
MRM3Q9HC36 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
MRM3Q9HC36 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.24■■□□□ 1.63
MRM3Q9HC36 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MRM3Q9HC36 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
MRM3Q9HC36 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MRM3Q9HC36 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
MRM3Q9HC36 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
MRM3Q9HC36 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.23■■□□□ 1.63
MRM3Q9HC36 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
MRM3Q9HC36 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.22■■□□□ 1.63
MRM3Q9HC36 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
MRM3Q9HC36 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.22■■□□□ 1.63
MRM3Q9HC36 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
MRM3Q9HC36 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.21■■□□□ 1.63
MRM3Q9HC36 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
MRM3Q9HC36 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
MRM3Q9HC36 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.2■■□□□ 1.62
MRM3Q9HC36 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
MRM3Q9HC36 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
MRM3Q9HC36 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.19■■□□□ 1.62
MRM3Q9HC36 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.19■■□□□ 1.62
MRM3Q9HC36 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC25.19■■□□□ 1.62
MRM3Q9HC36 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.19■■□□□ 1.62
MRM3Q9HC36 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.18■■□□□ 1.62
MRM3Q9HC36 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MRM3Q9HC36 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
MRM3Q9HC36 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
MRM3Q9HC36 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.18■■□□□ 1.62
MRM3Q9HC36 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.18■■□□□ 1.62
MRM3Q9HC36 LINC01971-201ENST00000617888 1048 ntBASIC25.18■■□□□ 1.62
MRM3Q9HC36 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
MRM3Q9HC36 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
MRM3Q9HC36 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
MRM3Q9HC36 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.16■■□□□ 1.62
MRM3Q9HC36 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
MRM3Q9HC36 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
MRM3Q9HC36 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
MRM3Q9HC36 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
MRM3Q9HC36 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MRM3Q9HC36 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.15■■□□□ 1.62
MRM3Q9HC36 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MRM3Q9HC36 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
MRM3Q9HC36 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
MRM3Q9HC36 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
MRM3Q9HC36 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
MRM3Q9HC36 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
MRM3Q9HC36 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
MRM3Q9HC36 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.14■■□□□ 1.62
MRM3Q9HC36 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
MRM3Q9HC36 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.14■■□□□ 1.62
MRM3Q9HC36 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.14■■□□□ 1.62
MRM3Q9HC36 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
MRM3Q9HC36 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
MRM3Q9HC36 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.13■■□□□ 1.61
MRM3Q9HC36 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
MRM3Q9HC36 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.12■■□□□ 1.61
MRM3Q9HC36 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.12■■□□□ 1.61
MRM3Q9HC36 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
MRM3Q9HC36 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.12■■□□□ 1.61
MRM3Q9HC36 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MRM3Q9HC36 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.12■■□□□ 1.61
MRM3Q9HC36 ABHD17AP4-201ENST00000411545 909 ntBASIC25.11■■□□□ 1.61
MRM3Q9HC36 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.11■■□□□ 1.61
MRM3Q9HC36 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.11■■□□□ 1.61
MRM3Q9HC36 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MRM3Q9HC36 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.09■■□□□ 1.61
MRM3Q9HC36 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.09■■□□□ 1.61
MRM3Q9HC36 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.08■■□□□ 1.61
MRM3Q9HC36 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
MRM3Q9HC36 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
MRM3Q9HC36 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MRM3Q9HC36 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MRM3Q9HC36 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.07■■□□□ 1.6
MRM3Q9HC36 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.07■■□□□ 1.6
MRM3Q9HC36 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L13-201ENST00000554103 1267 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L15-201ENST00000611059 1267 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L23-201ENST00000615195 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L24-201ENST00000617576 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L22-201ENST00000618238 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L20-201ENST00000619712 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L21-201ENST00000622058 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L10-201ENST00000622460 1267 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 DUX4L25-201ENST00000624915 1269 ntBASIC25.07■■□□□ 1.6
MRM3Q9HC36 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.07■■□□□ 1.6
MRM3Q9HC36 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
MRM3Q9HC36 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
MRM3Q9HC36 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
MRM3Q9HC36 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
MRM3Q9HC36 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.06■■□□□ 1.6
MRM3Q9HC36 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms