Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRTM1Q9HBL6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.16■■□□□ 1.46
LRTM1Q9HBL6 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LRTM1Q9HBL6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.16■■□□□ 1.46
LRTM1Q9HBL6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.15■■□□□ 1.46
LRTM1Q9HBL6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.15■■□□□ 1.46
LRTM1Q9HBL6 AC044849.2-201ENST00000606596 710 ntBASIC24.15■■□□□ 1.46
LRTM1Q9HBL6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.15■■□□□ 1.46
LRTM1Q9HBL6 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.13■■□□□ 1.45
LRTM1Q9HBL6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRTM1Q9HBL6 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LRTM1Q9HBL6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
LRTM1Q9HBL6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRTM1Q9HBL6 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRTM1Q9HBL6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LRTM1Q9HBL6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LRTM1Q9HBL6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
LRTM1Q9HBL6 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRTM1Q9HBL6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
LRTM1Q9HBL6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
LRTM1Q9HBL6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
LRTM1Q9HBL6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRTM1Q9HBL6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRTM1Q9HBL6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.07■■□□□ 1.44
LRTM1Q9HBL6 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
LRTM1Q9HBL6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
LRTM1Q9HBL6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
LRTM1Q9HBL6 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.04■■□□□ 1.44
LRTM1Q9HBL6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
LRTM1Q9HBL6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.03■■□□□ 1.44
LRTM1Q9HBL6 AC110285.7-201ENST00000624417 1536 ntBASIC24.03■■□□□ 1.44
LRTM1Q9HBL6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRTM1Q9HBL6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
LRTM1Q9HBL6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.02■■□□□ 1.44
LRTM1Q9HBL6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 AC021231.2-201ENST00000594613 730 ntBASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.01■■□□□ 1.43
LRTM1Q9HBL6 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRTM1Q9HBL6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24■■□□□ 1.43
LRTM1Q9HBL6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
LRTM1Q9HBL6 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
LRTM1Q9HBL6 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
LRTM1Q9HBL6 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24■■□□□ 1.43
LRTM1Q9HBL6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC24■■□□□ 1.43
LRTM1Q9HBL6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRTM1Q9HBL6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRTM1Q9HBL6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.99■■□□□ 1.43
LRTM1Q9HBL6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
LRTM1Q9HBL6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
LRTM1Q9HBL6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.97■■□□□ 1.43
LRTM1Q9HBL6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 DUX4L29-201ENST00000425409 679 ntBASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
LRTM1Q9HBL6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.95■■□□□ 1.43
LRTM1Q9HBL6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LRTM1Q9HBL6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
LRTM1Q9HBL6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
LRTM1Q9HBL6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
LRTM1Q9HBL6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms