Protein–RNA interactions for Protein: Q9H4S2

GSX1, GS homeobox 1, humanhuman

Predicted RBP Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSX1Q9H4S2 ECEL1P2-201ENST00000461596 1295 ntBASIC21.27■■□□□ 1
GSX1Q9H4S2 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
GSX1Q9H4S2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
GSX1Q9H4S2 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
GSX1Q9H4S2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
GSX1Q9H4S2 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
GSX1Q9H4S2 ABCB10P1-201ENST00000614297 2181 ntBASIC21.24■□□□□ 0.99
GSX1Q9H4S2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSX1Q9H4S2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
GSX1Q9H4S2 AL592293.1-201ENST00000502889 1188 ntBASIC21.23■□□□□ 0.99
GSX1Q9H4S2 AC148477.6-201ENST00000623746 465 ntBASIC21.23■□□□□ 0.99
GSX1Q9H4S2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSX1Q9H4S2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.22■□□□□ 0.99
GSX1Q9H4S2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GSX1Q9H4S2 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
GSX1Q9H4S2 KRT8P33-201ENST00000508125 1423 ntBASIC21.21■□□□□ 0.99
GSX1Q9H4S2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
GSX1Q9H4S2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GSX1Q9H4S2 AC009299.2-201ENST00000482477 511 ntBASIC21.21■□□□□ 0.99
GSX1Q9H4S2 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSX1Q9H4S2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSX1Q9H4S2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
GSX1Q9H4S2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
GSX1Q9H4S2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GSX1Q9H4S2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSX1Q9H4S2 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSX1Q9H4S2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSX1Q9H4S2 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GSX1Q9H4S2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
GSX1Q9H4S2 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GSX1Q9H4S2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.17■□□□□ 0.98
GSX1Q9H4S2 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GSX1Q9H4S2 MIR219A2-201ENST00000608502 1504 ntBASIC21.17■□□□□ 0.98
GSX1Q9H4S2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.16■□□□□ 0.98
GSX1Q9H4S2 AC133552.2-201ENST00000619106 1032 ntBASIC21.16■□□□□ 0.98
GSX1Q9H4S2 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 AC010980.1-201ENST00000587192 1142 ntBASIC21.15■□□□□ 0.98
GSX1Q9H4S2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 BHLHE23-202ENST00000612929 1109 ntBASIC21.15■□□□□ 0.98
GSX1Q9H4S2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
GSX1Q9H4S2 AC009831.1-201ENST00000580420 1582 ntBASIC21.14■□□□□ 0.98
GSX1Q9H4S2 AC110285.7-201ENST00000624417 1536 ntBASIC21.14■□□□□ 0.98
GSX1Q9H4S2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GSX1Q9H4S2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
GSX1Q9H4S2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
GSX1Q9H4S2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSX1Q9H4S2 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC21.13■□□□□ 0.97
GSX1Q9H4S2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSX1Q9H4S2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.13■□□□□ 0.97
GSX1Q9H4S2 WHAMMP2-203ENST00000563942 1603 ntBASIC21.13■□□□□ 0.97
GSX1Q9H4S2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
GSX1Q9H4S2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.12■□□□□ 0.97
GSX1Q9H4S2 GUSBP5-201ENST00000418136 578 ntBASIC21.12■□□□□ 0.97
GSX1Q9H4S2 RP9P-202ENST00000450133 1212 ntBASIC21.12■□□□□ 0.97
GSX1Q9H4S2 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC21.12■□□□□ 0.97
GSX1Q9H4S2 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GSX1Q9H4S2 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GSX1Q9H4S2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GSX1Q9H4S2 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
GSX1Q9H4S2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GSX1Q9H4S2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GSX1Q9H4S2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 AC007029.1-201ENST00000604183 313 ntBASIC21.09■□□□□ 0.97
GSX1Q9H4S2 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.09■□□□□ 0.97
GSX1Q9H4S2 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
GSX1Q9H4S2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.08■□□□□ 0.97
GSX1Q9H4S2 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.08■□□□□ 0.97
GSX1Q9H4S2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
GSX1Q9H4S2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSX1Q9H4S2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GSX1Q9H4S2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GSX1Q9H4S2 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC21.07■□□□□ 0.96
GSX1Q9H4S2 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GSX1Q9H4S2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms