Protein–RNA interactions for Protein: Q9H3R0

KDM4C, Lysine-specific demethylase 4C, humanhuman

Predictions only

Length 1,056 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4CQ9H3R0 AL135925.1-201ENST00000605920 1701 ntBASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
KDM4CQ9H3R0 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
KDM4CQ9H3R0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.04■■□□□ 1.76
KDM4CQ9H3R0 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.03■■□□□ 1.76
KDM4CQ9H3R0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
KDM4CQ9H3R0 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KDM4CQ9H3R0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
KDM4CQ9H3R0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
KDM4CQ9H3R0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
KDM4CQ9H3R0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
KDM4CQ9H3R0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
KDM4CQ9H3R0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26■■□□□ 1.75
KDM4CQ9H3R0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26■■□□□ 1.75
KDM4CQ9H3R0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
KDM4CQ9H3R0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
KDM4CQ9H3R0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
KDM4CQ9H3R0 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
KDM4CQ9H3R0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
KDM4CQ9H3R0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
KDM4CQ9H3R0 AL139393.2-201ENST00000608721 2025 ntBASIC25.97■■□□□ 1.75
KDM4CQ9H3R0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
KDM4CQ9H3R0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.96■■□□□ 1.75
KDM4CQ9H3R0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
KDM4CQ9H3R0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
KDM4CQ9H3R0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
KDM4CQ9H3R0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.95■■□□□ 1.74
KDM4CQ9H3R0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
KDM4CQ9H3R0 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.94■■□□□ 1.74
KDM4CQ9H3R0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.94■■□□□ 1.74
KDM4CQ9H3R0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.94■■□□□ 1.74
KDM4CQ9H3R0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.94■■□□□ 1.74
KDM4CQ9H3R0 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.94■■□□□ 1.74
KDM4CQ9H3R0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
KDM4CQ9H3R0 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
KDM4CQ9H3R0 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
KDM4CQ9H3R0 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.92■■□□□ 1.74
KDM4CQ9H3R0 AC127502.1-201ENST00000399971 1502 ntBASIC25.92■■□□□ 1.74
KDM4CQ9H3R0 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
KDM4CQ9H3R0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.91■■□□□ 1.74
KDM4CQ9H3R0 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
KDM4CQ9H3R0 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM4CQ9H3R0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM4CQ9H3R0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM4CQ9H3R0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
KDM4CQ9H3R0 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KDM4CQ9H3R0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.89■■□□□ 1.74
KDM4CQ9H3R0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
KDM4CQ9H3R0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
KDM4CQ9H3R0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
KDM4CQ9H3R0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC25.87■■□□□ 1.73
KDM4CQ9H3R0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
KDM4CQ9H3R0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
KDM4CQ9H3R0 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
KDM4CQ9H3R0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC25.86■■□□□ 1.73
KDM4CQ9H3R0 AC135983.2-203ENST00000454486 1613 ntBASIC25.85■■□□□ 1.73
KDM4CQ9H3R0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM4CQ9H3R0 HSD17B1P1-201ENST00000590052 955 ntBASIC25.85■■□□□ 1.73
KDM4CQ9H3R0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
KDM4CQ9H3R0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
KDM4CQ9H3R0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM4CQ9H3R0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
KDM4CQ9H3R0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.84■■□□□ 1.73
KDM4CQ9H3R0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
KDM4CQ9H3R0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
KDM4CQ9H3R0 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.83■■□□□ 1.73
KDM4CQ9H3R0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.83■■□□□ 1.72
KDM4CQ9H3R0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
KDM4CQ9H3R0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
KDM4CQ9H3R0 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
KDM4CQ9H3R0 AL449106.1-201ENST00000608517 1980 ntBASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms