Protein–RNA interactions for Protein: Q9H2M9

RAB3GAP2, Rab3 GTPase-activating protein non-catalytic subunit, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP2Q9H2M9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC37.68■■■■□ 3.62
RAB3GAP2Q9H2M9 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC37.67■■■■□ 3.62
RAB3GAP2Q9H2M9 AC018358.1-201ENST00000631079 1402 ntBASIC37.67■■■■□ 3.62
RAB3GAP2Q9H2M9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC37.67■■■■□ 3.62
RAB3GAP2Q9H2M9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC37.67■■■■□ 3.62
RAB3GAP2Q9H2M9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC37.66■■■■□ 3.62
RAB3GAP2Q9H2M9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC37.66■■■■□ 3.62
RAB3GAP2Q9H2M9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC37.66■■■■□ 3.62
RAB3GAP2Q9H2M9 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.66■■■■□ 3.62
RAB3GAP2Q9H2M9 AC142086.6-201ENST00000621154 1765 ntBASIC37.65■■■■□ 3.62
RAB3GAP2Q9H2M9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC37.65■■■■□ 3.62
RAB3GAP2Q9H2M9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC37.64■■■■□ 3.62
RAB3GAP2Q9H2M9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC37.64■■■■□ 3.62
RAB3GAP2Q9H2M9 AC008813.1-201ENST00000536597 885 ntBASIC37.64■■■■□ 3.62
RAB3GAP2Q9H2M9 MIR4449-201ENST00000578365 66 ntBASIC37.64■■■■□ 3.62
RAB3GAP2Q9H2M9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC37.63■■■■□ 3.61
RAB3GAP2Q9H2M9 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC37.62■■■■□ 3.61
RAB3GAP2Q9H2M9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC37.62■■■■□ 3.61
RAB3GAP2Q9H2M9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC37.62■■■■□ 3.61
RAB3GAP2Q9H2M9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC37.61■■■■□ 3.61
RAB3GAP2Q9H2M9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC37.61■■■■□ 3.61
RAB3GAP2Q9H2M9 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
RAB3GAP2Q9H2M9 AC148477.6-201ENST00000623746 465 ntBASIC37.6■■■■□ 3.61
RAB3GAP2Q9H2M9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC37.6■■■■□ 3.61
RAB3GAP2Q9H2M9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC37.59■■■■□ 3.61
RAB3GAP2Q9H2M9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC37.58■■■■□ 3.61
RAB3GAP2Q9H2M9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
RAB3GAP2Q9H2M9 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC37.58■■■■□ 3.61
RAB3GAP2Q9H2M9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC37.58■■■■□ 3.61
RAB3GAP2Q9H2M9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
RAB3GAP2Q9H2M9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC37.57■■■■□ 3.6
RAB3GAP2Q9H2M9 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC37.57■■■■□ 3.6
RAB3GAP2Q9H2M9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC37.56■■■■□ 3.6
RAB3GAP2Q9H2M9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC37.56■■■■□ 3.6
RAB3GAP2Q9H2M9 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC37.55■■■■□ 3.6
RAB3GAP2Q9H2M9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
RAB3GAP2Q9H2M9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC37.53■■■■□ 3.6
RAB3GAP2Q9H2M9 MIR219A2-201ENST00000608502 1504 ntBASIC37.53■■■■□ 3.6
RAB3GAP2Q9H2M9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC37.52■■■■□ 3.6
RAB3GAP2Q9H2M9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC37.52■■■■□ 3.6
RAB3GAP2Q9H2M9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC37.52■■■■□ 3.6
RAB3GAP2Q9H2M9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.51■■■■□ 3.6
RAB3GAP2Q9H2M9 LINC01003-201ENST00000564834 1764 ntBASIC37.51■■■■□ 3.59
RAB3GAP2Q9H2M9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC37.5■■■■□ 3.59
RAB3GAP2Q9H2M9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC37.5■■■■□ 3.59
RAB3GAP2Q9H2M9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC37.5■■■■□ 3.59
RAB3GAP2Q9H2M9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC37.49■■■■□ 3.59
RAB3GAP2Q9H2M9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC37.48■■■■□ 3.59
RAB3GAP2Q9H2M9 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC37.48■■■■□ 3.59
RAB3GAP2Q9H2M9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC37.46■■■■□ 3.59
RAB3GAP2Q9H2M9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
RAB3GAP2Q9H2M9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC37.44■■■■□ 3.58
RAB3GAP2Q9H2M9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC37.44■■■■□ 3.58
RAB3GAP2Q9H2M9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
RAB3GAP2Q9H2M9 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.44■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC37.43■■■■□ 3.58
RAB3GAP2Q9H2M9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
RAB3GAP2Q9H2M9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC37.42■■■■□ 3.58
RAB3GAP2Q9H2M9 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC37.42■■■■□ 3.58
RAB3GAP2Q9H2M9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC37.41■■■■□ 3.58
RAB3GAP2Q9H2M9 BX255925.1-201ENST00000566954 1854 ntBASIC37.4■■■■□ 3.58
RAB3GAP2Q9H2M9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC37.4■■■■□ 3.58
RAB3GAP2Q9H2M9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC37.4■■■■□ 3.58
RAB3GAP2Q9H2M9 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
RAB3GAP2Q9H2M9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC37.39■■■■□ 3.58
RAB3GAP2Q9H2M9 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.39■■■■□ 3.58
RAB3GAP2Q9H2M9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC37.38■■■■□ 3.58
RAB3GAP2Q9H2M9 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC37.38■■■■□ 3.57
RAB3GAP2Q9H2M9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC37.37■■■■□ 3.57
RAB3GAP2Q9H2M9 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC37.37■■■■□ 3.57
RAB3GAP2Q9H2M9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC37.36■■■■□ 3.57
RAB3GAP2Q9H2M9 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC37.36■■■■□ 3.57
RAB3GAP2Q9H2M9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC37.35■■■■□ 3.57
RAB3GAP2Q9H2M9 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC37.35■■■■□ 3.57
RAB3GAP2Q9H2M9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC37.34■■■■□ 3.57
RAB3GAP2Q9H2M9 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC37.34■■■■□ 3.57
RAB3GAP2Q9H2M9 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
RAB3GAP2Q9H2M9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms