Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
RPAP1Q9BWH6 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.7■■■□□ 2.51
RPAP1Q9BWH6 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.51
RPAP1Q9BWH6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RPAP1Q9BWH6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RPAP1Q9BWH6 AC142086.6-201ENST00000621154 1765 ntBASIC30.7■■■□□ 2.5
RPAP1Q9BWH6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RPAP1Q9BWH6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RPAP1Q9BWH6 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.69■■■□□ 2.5
RPAP1Q9BWH6 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.69■■■□□ 2.5
RPAP1Q9BWH6 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RPAP1Q9BWH6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RPAP1Q9BWH6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
RPAP1Q9BWH6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.68■■■□□ 2.5
RPAP1Q9BWH6 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.68■■■□□ 2.5
RPAP1Q9BWH6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
RPAP1Q9BWH6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.66■■■□□ 2.5
RPAP1Q9BWH6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.66■■■□□ 2.5
RPAP1Q9BWH6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
RPAP1Q9BWH6 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RPAP1Q9BWH6 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.66■■■□□ 2.5
RPAP1Q9BWH6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
RPAP1Q9BWH6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
RPAP1Q9BWH6 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.65■■■□□ 2.5
RPAP1Q9BWH6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
RPAP1Q9BWH6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
RPAP1Q9BWH6 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
RPAP1Q9BWH6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RPAP1Q9BWH6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
RPAP1Q9BWH6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
RPAP1Q9BWH6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.63■■■□□ 2.49
RPAP1Q9BWH6 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RPAP1Q9BWH6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.62■■■□□ 2.49
RPAP1Q9BWH6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RPAP1Q9BWH6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC30.61■■■□□ 2.49
RPAP1Q9BWH6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
RPAP1Q9BWH6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.61■■■□□ 2.49
RPAP1Q9BWH6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RPAP1Q9BWH6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
RPAP1Q9BWH6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
RPAP1Q9BWH6 AC148477.6-201ENST00000623746 465 ntBASIC30.6■■■□□ 2.49
RPAP1Q9BWH6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
RPAP1Q9BWH6 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 AC022413.1-201ENST00000624602 984 ntBASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
RPAP1Q9BWH6 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC30.58■■■□□ 2.49
RPAP1Q9BWH6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.58■■■□□ 2.49
RPAP1Q9BWH6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
RPAP1Q9BWH6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
RPAP1Q9BWH6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
RPAP1Q9BWH6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RPAP1Q9BWH6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RPAP1Q9BWH6 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC30.55■■■□□ 2.48
RPAP1Q9BWH6 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RPAP1Q9BWH6 AC110285.7-201ENST00000624417 1536 ntBASIC30.55■■■□□ 2.48
RPAP1Q9BWH6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
RPAP1Q9BWH6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.54■■■□□ 2.48
RPAP1Q9BWH6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.54■■■□□ 2.48
RPAP1Q9BWH6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RPAP1Q9BWH6 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC30.53■■■□□ 2.48
RPAP1Q9BWH6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.52■■■□□ 2.48
RPAP1Q9BWH6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.52■■■□□ 2.48
RPAP1Q9BWH6 NTF6A-201ENST00000591175 560 ntBASIC30.52■■■□□ 2.48
RPAP1Q9BWH6 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC30.51■■■□□ 2.48
RPAP1Q9BWH6 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC30.51■■■□□ 2.48
RPAP1Q9BWH6 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
RPAP1Q9BWH6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RPAP1Q9BWH6 AC100797.4-201ENST00000631653 1827 ntBASIC30.49■■■□□ 2.47
RPAP1Q9BWH6 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RPAP1Q9BWH6 AC060814.1-201ENST00000554326 538 ntBASIC30.49■■■□□ 2.47
RPAP1Q9BWH6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
RPAP1Q9BWH6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RPAP1Q9BWH6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.48■■■□□ 2.47
RPAP1Q9BWH6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
RPAP1Q9BWH6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.48■■■□□ 2.47
RPAP1Q9BWH6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
RPAP1Q9BWH6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms