Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 MIR4449-201ENST00000578365 66 ntBASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.36■■□□□ 1.81
TRIM62Q9BVG3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
TRIM62Q9BVG3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.35■■□□□ 1.81
TRIM62Q9BVG3 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 AC142086.6-201ENST00000621154 1765 ntBASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRIM62Q9BVG3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM62Q9BVG3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TRIM62Q9BVG3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.32■■□□□ 1.8
TRIM62Q9BVG3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM62Q9BVG3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TRIM62Q9BVG3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRIM62Q9BVG3 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
TRIM62Q9BVG3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRIM62Q9BVG3 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TRIM62Q9BVG3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
TRIM62Q9BVG3 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 MIR219A2-201ENST00000608502 1504 ntBASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TRIM62Q9BVG3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TRIM62Q9BVG3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM62Q9BVG3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TRIM62Q9BVG3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
TRIM62Q9BVG3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
TRIM62Q9BVG3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TRIM62Q9BVG3 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
TRIM62Q9BVG3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM62Q9BVG3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM62Q9BVG3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TRIM62Q9BVG3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TRIM62Q9BVG3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TRIM62Q9BVG3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TRIM62Q9BVG3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC26.21■■□□□ 1.79
TRIM62Q9BVG3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.2■■□□□ 1.79
TRIM62Q9BVG3 LINC01003-201ENST00000564834 1764 ntBASIC26.2■■□□□ 1.79
TRIM62Q9BVG3 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRIM62Q9BVG3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM62Q9BVG3 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM62Q9BVG3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM62Q9BVG3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
TRIM62Q9BVG3 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
TRIM62Q9BVG3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC26.19■■□□□ 1.78
TRIM62Q9BVG3 BX255925.1-201ENST00000566954 1854 ntBASIC26.19■■□□□ 1.78
TRIM62Q9BVG3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
TRIM62Q9BVG3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
TRIM62Q9BVG3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM62Q9BVG3 AC126177.7-201ENST00000547904 679 ntBASIC26.18■■□□□ 1.78
TRIM62Q9BVG3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.18■■□□□ 1.78
TRIM62Q9BVG3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
TRIM62Q9BVG3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.16■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms