Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RPS2-202ENST00000526522 924 ntTSL 2 BASIC21.12■□□□□ 0.97
CCL13Q99616 AC142086.6-201ENST00000621154 1765 ntBASIC21.12■□□□□ 0.97
CCL13Q99616 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCL13Q99616 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.11■□□□□ 0.97
CCL13Q99616 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCL13Q99616 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.11■□□□□ 0.97
CCL13Q99616 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCL13Q99616 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCL13Q99616 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CCL13Q99616 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CCL13Q99616 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCL13Q99616 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL13Q99616 MBP-237ENST00000579129 1052 ntTSL 5 BASIC21.1■□□□□ 0.97
CCL13Q99616 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL13Q99616 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.09■□□□□ 0.97
CCL13Q99616 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCL13Q99616 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC21.09■□□□□ 0.97
CCL13Q99616 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCL13Q99616 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL13Q99616 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL13Q99616 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCL13Q99616 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CCL13Q99616 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCL13Q99616 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.07■□□□□ 0.96
CCL13Q99616 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.07■□□□□ 0.96
CCL13Q99616 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL13Q99616 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCL13Q99616 MIR639-201ENST00000384974 98 ntBASIC21.06■□□□□ 0.96
CCL13Q99616 AC008813.1-201ENST00000536597 885 ntBASIC21.06■□□□□ 0.96
CCL13Q99616 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CCL13Q99616 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL13Q99616 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCL13Q99616 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL13Q99616 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCL13Q99616 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCL13Q99616 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCL13Q99616 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCL13Q99616 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
CCL13Q99616 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC21.03■□□□□ 0.96
CCL13Q99616 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCL13Q99616 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
CCL13Q99616 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCL13Q99616 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCL13Q99616 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.01■□□□□ 0.95
CCL13Q99616 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL13Q99616 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCL13Q99616 AC018358.1-201ENST00000631079 1402 ntBASIC21.01■□□□□ 0.95
CCL13Q99616 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL13Q99616 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCL13Q99616 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCL13Q99616 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCL13Q99616 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21■□□□□ 0.95
CCL13Q99616 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCL13Q99616 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC20.99■□□□□ 0.95
CCL13Q99616 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CCL13Q99616 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCL13Q99616 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CCL13Q99616 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.98■□□□□ 0.95
CCL13Q99616 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCL13Q99616 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCL13Q99616 LINC01003-201ENST00000564834 1764 ntBASIC20.97■□□□□ 0.95
CCL13Q99616 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CCL13Q99616 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.97■□□□□ 0.95
CCL13Q99616 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL13Q99616 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CCL13Q99616 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL13Q99616 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCL13Q99616 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CCL13Q99616 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL13Q99616 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCL13Q99616 MIR219A2-201ENST00000608502 1504 ntBASIC20.95■□□□□ 0.94
CCL13Q99616 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCL13Q99616 BX255925.1-201ENST00000566954 1854 ntBASIC20.95■□□□□ 0.94
CCL13Q99616 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL13Q99616 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCL13Q99616 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.94■□□□□ 0.94
CCL13Q99616 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCL13Q99616 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CCL13Q99616 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCL13Q99616 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CCL13Q99616 AC148477.6-201ENST00000623746 465 ntBASIC20.94■□□□□ 0.94
CCL13Q99616 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL13Q99616 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL13Q99616 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCL13Q99616 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.93■□□□□ 0.94
CCL13Q99616 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 MIR4449-201ENST00000578365 66 ntBASIC20.92■□□□□ 0.94
CCL13Q99616 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CCL13Q99616 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.92■□□□□ 0.94
CCL13Q99616 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCL13Q99616 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CCL13Q99616 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCL13Q99616 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.91■□□□□ 0.94
CCL13Q99616 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms