Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHCHD1Q96BP2 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CHCHD1Q96BP2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CHCHD1Q96BP2 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHCHD1Q96BP2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHCHD1Q96BP2 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.35■□□□□ 0.53
CHCHD1Q96BP2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CHCHD1Q96BP2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 AC010864.1-201ENST00000609407 1511 ntBASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHCHD1Q96BP2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD1Q96BP2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHCHD1Q96BP2 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHCHD1Q96BP2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.32■□□□□ 0.52
CHCHD1Q96BP2 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD1Q96BP2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD1Q96BP2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CHCHD1Q96BP2 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHCHD1Q96BP2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHCHD1Q96BP2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHCHD1Q96BP2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC18.29■□□□□ 0.52
CHCHD1Q96BP2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CHCHD1Q96BP2 AC012676.1-201ENST00000574705 1949 ntBASIC18.29■□□□□ 0.52
CHCHD1Q96BP2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CHCHD1Q96BP2 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD1Q96BP2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.28■□□□□ 0.52
CHCHD1Q96BP2 AC092803.2-201ENST00000564287 1899 ntBASIC18.28■□□□□ 0.52
CHCHD1Q96BP2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CHCHD1Q96BP2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CHCHD1Q96BP2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHCHD1Q96BP2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CHCHD1Q96BP2 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHCHD1Q96BP2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
CHCHD1Q96BP2 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CHCHD1Q96BP2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CHCHD1Q96BP2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CHCHD1Q96BP2 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.25■□□□□ 0.51
CHCHD1Q96BP2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CHCHD1Q96BP2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHCHD1Q96BP2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CHCHD1Q96BP2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC18.23■□□□□ 0.51
CHCHD1Q96BP2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 ERN1-208ENST00000606895 2068 ntBASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CHCHD1Q96BP2 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.21■□□□□ 0.51
CHCHD1Q96BP2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHCHD1Q96BP2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHCHD1Q96BP2 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CHCHD1Q96BP2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CHCHD1Q96BP2 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CHCHD1Q96BP2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.21■□□□□ 0.5
CHCHD1Q96BP2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 AC133561.1-201ENST00000568600 2415 ntBASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHCHD1Q96BP2 LINC00543-201ENST00000567234 1845 ntBASIC18.19■□□□□ 0.5
CHCHD1Q96BP2 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHCHD1Q96BP2 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHCHD1Q96BP2 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms