Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40AQ8WXH6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40AQ8WXH6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40AQ8WXH6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
RAB40AQ8WXH6 ABHD17AP4-201ENST00000411545 909 ntBASIC21.95■■□□□ 1.1
RAB40AQ8WXH6 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
RAB40AQ8WXH6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
RAB40AQ8WXH6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
RAB40AQ8WXH6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB40AQ8WXH6 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.94■■□□□ 1.1
RAB40AQ8WXH6 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.94■■□□□ 1.1
RAB40AQ8WXH6 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RAB40AQ8WXH6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RAB40AQ8WXH6 AC108673.1-201ENST00000510422 1159 ntBASIC21.93■■□□□ 1.1
RAB40AQ8WXH6 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RAB40AQ8WXH6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.91■■□□□ 1.1
RAB40AQ8WXH6 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RAB40AQ8WXH6 AC091060.1-201ENST00000623524 1766 ntBASIC21.91■■□□□ 1.1
RAB40AQ8WXH6 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RAB40AQ8WXH6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.91■■□□□ 1.1
RAB40AQ8WXH6 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RAB40AQ8WXH6 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.89■■□□□ 1.09
RAB40AQ8WXH6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB40AQ8WXH6 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
RAB40AQ8WXH6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.88■■□□□ 1.09
RAB40AQ8WXH6 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40AQ8WXH6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40AQ8WXH6 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB40AQ8WXH6 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
RAB40AQ8WXH6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB40AQ8WXH6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.87■■□□□ 1.09
RAB40AQ8WXH6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB40AQ8WXH6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40AQ8WXH6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40AQ8WXH6 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB40AQ8WXH6 DUX4L29-201ENST00000425409 679 ntBASIC21.86■■□□□ 1.09
RAB40AQ8WXH6 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB40AQ8WXH6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB40AQ8WXH6 MIR6090-201ENST00000622481 60 ntBASIC21.85■■□□□ 1.09
RAB40AQ8WXH6 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB40AQ8WXH6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 AC127502.1-201ENST00000399971 1502 ntBASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RAB40AQ8WXH6 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB40AQ8WXH6 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB40AQ8WXH6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.83■■□□□ 1.09
RAB40AQ8WXH6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB40AQ8WXH6 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.83■■□□□ 1.09
RAB40AQ8WXH6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RAB40AQ8WXH6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RAB40AQ8WXH6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.83■■□□□ 1.08
RAB40AQ8WXH6 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RAB40AQ8WXH6 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RAB40AQ8WXH6 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.82■■□□□ 1.08
RAB40AQ8WXH6 MIR7108-201ENST00000614319 87 ntBASIC21.82■■□□□ 1.08
RAB40AQ8WXH6 HGH1-207ENST00000628266 258 ntTSL 5 BASIC21.82■■□□□ 1.08
RAB40AQ8WXH6 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RAB40AQ8WXH6 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.81■■□□□ 1.08
RAB40AQ8WXH6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
RAB40AQ8WXH6 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 AC100797.4-201ENST00000631653 1827 ntBASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 AC145676.1-201ENST00000514988 2004 ntBASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 AP002414.2-202ENST00000590929 1450 ntBASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 ZNRF2P2-203ENST00000454624 420 ntBASIC21.8■■□□□ 1.08
RAB40AQ8WXH6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.79■■□□□ 1.08
RAB40AQ8WXH6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RAB40AQ8WXH6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RAB40AQ8WXH6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RAB40AQ8WXH6 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RAB40AQ8WXH6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RAB40AQ8WXH6 AC021231.2-201ENST00000594613 730 ntBASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14 ms