Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
STAG1Q8WVM7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
STAG1Q8WVM7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
STAG1Q8WVM7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
STAG1Q8WVM7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
STAG1Q8WVM7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 AC148477.6-201ENST00000623746 465 ntBASIC29.88■■■□□ 2.37
STAG1Q8WVM7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
STAG1Q8WVM7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 AC018358.1-201ENST00000631079 1402 ntBASIC29.87■■■□□ 2.37
STAG1Q8WVM7 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
STAG1Q8WVM7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.86■■■□□ 2.37
STAG1Q8WVM7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC29.86■■■□□ 2.37
STAG1Q8WVM7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.86■■■□□ 2.37
STAG1Q8WVM7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.86■■■□□ 2.37
STAG1Q8WVM7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC29.85■■■□□ 2.37
STAG1Q8WVM7 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
STAG1Q8WVM7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC29.85■■■□□ 2.37
STAG1Q8WVM7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
STAG1Q8WVM7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
STAG1Q8WVM7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
STAG1Q8WVM7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.82■■■□□ 2.36
STAG1Q8WVM7 AC142086.6-201ENST00000621154 1765 ntBASIC29.82■■■□□ 2.36
STAG1Q8WVM7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
STAG1Q8WVM7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
STAG1Q8WVM7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC29.81■■■□□ 2.36
STAG1Q8WVM7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.81■■■□□ 2.36
STAG1Q8WVM7 MIR219A2-201ENST00000608502 1504 ntBASIC29.81■■■□□ 2.36
STAG1Q8WVM7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
STAG1Q8WVM7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
STAG1Q8WVM7 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
STAG1Q8WVM7 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
STAG1Q8WVM7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 HSD17B1P1-201ENST00000590052 955 ntBASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC29.78■■■□□ 2.36
STAG1Q8WVM7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC29.77■■■□□ 2.36
STAG1Q8WVM7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
STAG1Q8WVM7 ABHD17AP3-201ENST00000503096 1137 ntBASIC29.77■■■□□ 2.36
STAG1Q8WVM7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.77■■■□□ 2.36
STAG1Q8WVM7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.76■■■□□ 2.35
STAG1Q8WVM7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
STAG1Q8WVM7 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
STAG1Q8WVM7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
STAG1Q8WVM7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.76■■■□□ 2.35
STAG1Q8WVM7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.75■■■□□ 2.35
STAG1Q8WVM7 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC29.75■■■□□ 2.35
STAG1Q8WVM7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
STAG1Q8WVM7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.75■■■□□ 2.35
STAG1Q8WVM7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
STAG1Q8WVM7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
STAG1Q8WVM7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.74■■■□□ 2.35
STAG1Q8WVM7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC29.74■■■□□ 2.35
STAG1Q8WVM7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.74■■■□□ 2.35
STAG1Q8WVM7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
STAG1Q8WVM7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.73■■■□□ 2.35
STAG1Q8WVM7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
STAG1Q8WVM7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
STAG1Q8WVM7 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
STAG1Q8WVM7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.72■■■□□ 2.35
STAG1Q8WVM7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.72■■■□□ 2.35
STAG1Q8WVM7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
STAG1Q8WVM7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC29.71■■■□□ 2.35
STAG1Q8WVM7 LINC01003-201ENST00000564834 1764 ntBASIC29.71■■■□□ 2.35
STAG1Q8WVM7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
STAG1Q8WVM7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
STAG1Q8WVM7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC29.7■■■□□ 2.34
STAG1Q8WVM7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC29.69■■■□□ 2.34
STAG1Q8WVM7 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
STAG1Q8WVM7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC29.69■■■□□ 2.34
STAG1Q8WVM7 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.69■■■□□ 2.34
STAG1Q8WVM7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
STAG1Q8WVM7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC29.68■■■□□ 2.34
STAG1Q8WVM7 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC29.68■■■□□ 2.34
STAG1Q8WVM7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC29.67■■■□□ 2.34
STAG1Q8WVM7 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
STAG1Q8WVM7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.66■■■□□ 2.34
STAG1Q8WVM7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.66■■■□□ 2.34
STAG1Q8WVM7 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms