Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RPS4Y2Q8TD47 WHAMMP2-203ENST00000563942 1603 ntBASIC22.05■■□□□ 1.12
RPS4Y2Q8TD47 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.05■■□□□ 1.12
RPS4Y2Q8TD47 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.05■■□□□ 1.12
RPS4Y2Q8TD47 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 AC145676.1-201ENST00000514988 2004 ntBASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
RPS4Y2Q8TD47 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.03■■□□□ 1.12
RPS4Y2Q8TD47 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RPS4Y2Q8TD47 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RPS4Y2Q8TD47 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.02■■□□□ 1.12
RPS4Y2Q8TD47 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RPS4Y2Q8TD47 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
RPS4Y2Q8TD47 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 SUZ12P1-203ENST00000578195 985 ntBASIC22■■□□□ 1.11
RPS4Y2Q8TD47 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
RPS4Y2Q8TD47 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.99■■□□□ 1.11
RPS4Y2Q8TD47 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RPS4Y2Q8TD47 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.99■■□□□ 1.11
RPS4Y2Q8TD47 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RPS4Y2Q8TD47 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.98■■□□□ 1.11
RPS4Y2Q8TD47 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.98■■□□□ 1.11
RPS4Y2Q8TD47 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RPS4Y2Q8TD47 LINC00273-201ENST00000539813 1452 ntBASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RPS4Y2Q8TD47 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPS4Y2Q8TD47 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
RPS4Y2Q8TD47 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.95■■□□□ 1.1
RPS4Y2Q8TD47 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 DUSP8P4-201ENST00000399538 1761 ntBASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
RPS4Y2Q8TD47 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPS4Y2Q8TD47 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.93■■□□□ 1.1
RPS4Y2Q8TD47 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
RPS4Y2Q8TD47 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 EI24-212ENST00000615917 1407 ntTSL 2 BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 AC020928.2-201ENST00000588717 2197 ntBASIC21.92■■□□□ 1.1
RPS4Y2Q8TD47 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPS4Y2Q8TD47 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RPS4Y2Q8TD47 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RPS4Y2Q8TD47 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
RPS4Y2Q8TD47 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RPS4Y2Q8TD47 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPS4Y2Q8TD47 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RPS4Y2Q8TD47 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RPS4Y2Q8TD47 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPS4Y2Q8TD47 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RPS4Y2Q8TD47 AC108673.1-201ENST00000510422 1159 ntBASIC21.89■■□□□ 1.09
RPS4Y2Q8TD47 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RPS4Y2Q8TD47 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RPS4Y2Q8TD47 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RPS4Y2Q8TD47 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.88■■□□□ 1.09
RPS4Y2Q8TD47 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RPS4Y2Q8TD47 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.87■■□□□ 1.09
RPS4Y2Q8TD47 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPS4Y2Q8TD47 MIR6090-201ENST00000622481 60 ntBASIC21.87■■□□□ 1.09
RPS4Y2Q8TD47 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPS4Y2Q8TD47 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RPS4Y2Q8TD47 AC092803.2-201ENST00000564287 1899 ntBASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms