Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L13-201ENST00000554103 1267 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L15-201ENST00000611059 1267 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L23-201ENST00000615195 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L24-201ENST00000617576 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L22-201ENST00000618238 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L20-201ENST00000619712 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L21-201ENST00000622058 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L10-201ENST00000622460 1267 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 DUX4L25-201ENST00000624915 1269 ntBASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
HMGCLL1Q8TB92 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCLL1Q8TB92 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
HMGCLL1Q8TB92 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.74■■□□□ 1.55
HMGCLL1Q8TB92 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
HMGCLL1Q8TB92 AC100797.4-201ENST00000631653 1827 ntBASIC24.72■■□□□ 1.55
HMGCLL1Q8TB92 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCLL1Q8TB92 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCLL1Q8TB92 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
HMGCLL1Q8TB92 RNF166-209ENST00000567844 633 ntTSL 5 BASIC24.72■■□□□ 1.55
HMGCLL1Q8TB92 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
HMGCLL1Q8TB92 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
HMGCLL1Q8TB92 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.7■■□□□ 1.54
HMGCLL1Q8TB92 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC24.7■■□□□ 1.54
HMGCLL1Q8TB92 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.7■■□□□ 1.54
HMGCLL1Q8TB92 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.7■■□□□ 1.54
HMGCLL1Q8TB92 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.69■■□□□ 1.54
HMGCLL1Q8TB92 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCLL1Q8TB92 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
HMGCLL1Q8TB92 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCLL1Q8TB92 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCLL1Q8TB92 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCLL1Q8TB92 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
HMGCLL1Q8TB92 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
HMGCLL1Q8TB92 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCLL1Q8TB92 LINC01003-201ENST00000564834 1764 ntBASIC24.67■■□□□ 1.54
HMGCLL1Q8TB92 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
HMGCLL1Q8TB92 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
HMGCLL1Q8TB92 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 MIR3648-2-201ENST00000581792 180 ntBASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 MIR3648-1-201ENST00000615959 180 ntBASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 CR559946.2-201ENST00000623684 991 ntBASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
HMGCLL1Q8TB92 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCLL1Q8TB92 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.54
HMGCLL1Q8TB92 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
HMGCLL1Q8TB92 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HMGCLL1Q8TB92 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
HMGCLL1Q8TB92 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 AC110285.7-201ENST00000624417 1536 ntBASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
HMGCLL1Q8TB92 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
HMGCLL1Q8TB92 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCLL1Q8TB92 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCLL1Q8TB92 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
HMGCLL1Q8TB92 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.61■■□□□ 1.53
HMGCLL1Q8TB92 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 PEX7-203ENST00000541292 945 ntTSL 5 BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
HMGCLL1Q8TB92 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.59■■□□□ 1.53
HMGCLL1Q8TB92 AP002414.2-202ENST00000590929 1450 ntBASIC24.59■■□□□ 1.53
HMGCLL1Q8TB92 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.59■■□□□ 1.53
HMGCLL1Q8TB92 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms