Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
SNIP1Q8TAD8 AC133552.2-201ENST00000619106 1032 ntBASIC23.97■■□□□ 1.43
SNIP1Q8TAD8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SNIP1Q8TAD8 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
SNIP1Q8TAD8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SNIP1Q8TAD8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
SNIP1Q8TAD8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
SNIP1Q8TAD8 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
SNIP1Q8TAD8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC23.95■■□□□ 1.42
SNIP1Q8TAD8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SNIP1Q8TAD8 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.93■■□□□ 1.42
SNIP1Q8TAD8 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.92■■□□□ 1.42
SNIP1Q8TAD8 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.92■■□□□ 1.42
SNIP1Q8TAD8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNIP1Q8TAD8 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SNIP1Q8TAD8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC23.91■■□□□ 1.42
SNIP1Q8TAD8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
SNIP1Q8TAD8 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
SNIP1Q8TAD8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
SNIP1Q8TAD8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SNIP1Q8TAD8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.9■■□□□ 1.42
SNIP1Q8TAD8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.9■■□□□ 1.42
SNIP1Q8TAD8 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
SNIP1Q8TAD8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC23.89■■□□□ 1.42
SNIP1Q8TAD8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC23.89■■□□□ 1.42
SNIP1Q8TAD8 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
SNIP1Q8TAD8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.89■■□□□ 1.41
SNIP1Q8TAD8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SNIP1Q8TAD8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC23.89■■□□□ 1.41
SNIP1Q8TAD8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.89■■□□□ 1.41
SNIP1Q8TAD8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SNIP1Q8TAD8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SNIP1Q8TAD8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC23.88■■□□□ 1.41
SNIP1Q8TAD8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
SNIP1Q8TAD8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
SNIP1Q8TAD8 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.87■■□□□ 1.41
SNIP1Q8TAD8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.87■■□□□ 1.41
SNIP1Q8TAD8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNIP1Q8TAD8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SNIP1Q8TAD8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
SNIP1Q8TAD8 AC074183.2-201ENST00000623112 922 ntBASIC23.86■■□□□ 1.41
SNIP1Q8TAD8 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
SNIP1Q8TAD8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
SNIP1Q8TAD8 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 AC009299.2-201ENST00000482477 511 ntBASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
SNIP1Q8TAD8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNIP1Q8TAD8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
SNIP1Q8TAD8 RP9P-202ENST00000450133 1212 ntBASIC23.83■■□□□ 1.41
SNIP1Q8TAD8 AC026202.3-201ENST00000600805 1127 ntBASIC23.83■■□□□ 1.41
SNIP1Q8TAD8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.83■■□□□ 1.41
SNIP1Q8TAD8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
SNIP1Q8TAD8 SMPD5-203ENST00000639008 1464 ntBASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 AC131212.1-201ENST00000613771 668 ntBASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.82■■□□□ 1.4
SNIP1Q8TAD8 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNIP1Q8TAD8 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SNIP1Q8TAD8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SNIP1Q8TAD8 DUX4L9-201ENST00000449051 1259 ntBASIC23.81■■□□□ 1.4
SNIP1Q8TAD8 BHLHE23-202ENST00000612929 1109 ntBASIC23.81■■□□□ 1.4
SNIP1Q8TAD8 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.8■■□□□ 1.4
SNIP1Q8TAD8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC23.8■■□□□ 1.4
SNIP1Q8TAD8 AC010980.1-201ENST00000587192 1142 ntBASIC23.8■■□□□ 1.4
SNIP1Q8TAD8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
SNIP1Q8TAD8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
SNIP1Q8TAD8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
SNIP1Q8TAD8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC23.79■■□□□ 1.4
SNIP1Q8TAD8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
SNIP1Q8TAD8 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
SNIP1Q8TAD8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
SNIP1Q8TAD8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.77■■□□□ 1.4
SNIP1Q8TAD8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.77■■□□□ 1.4
SNIP1Q8TAD8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 KRT8P33-201ENST00000508125 1423 ntBASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
SNIP1Q8TAD8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC23.76■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms