Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPSF7Q8N684 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.51■■□□□ 1.51
CPSF7Q8N684 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC24.51■■□□□ 1.51
CPSF7Q8N684 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CPSF7Q8N684 AC091060.1-201ENST00000623524 1766 ntBASIC24.51■■□□□ 1.51
CPSF7Q8N684 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF7Q8N684 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF7Q8N684 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.5■■□□□ 1.51
CPSF7Q8N684 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF7Q8N684 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CPSF7Q8N684 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF7Q8N684 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF7Q8N684 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.49■■□□□ 1.51
CPSF7Q8N684 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
CPSF7Q8N684 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
CPSF7Q8N684 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CPSF7Q8N684 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CPSF7Q8N684 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPSF7Q8N684 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPSF7Q8N684 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CPSF7Q8N684 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPSF7Q8N684 MIR7108-201ENST00000614319 87 ntBASIC24.47■■□□□ 1.51
CPSF7Q8N684 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
CPSF7Q8N684 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CPSF7Q8N684 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.46■■□□□ 1.51
CPSF7Q8N684 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.46■■□□□ 1.51
CPSF7Q8N684 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC24.46■■□□□ 1.51
CPSF7Q8N684 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CPSF7Q8N684 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CPSF7Q8N684 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.45■■□□□ 1.5
CPSF7Q8N684 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPSF7Q8N684 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CPSF7Q8N684 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CPSF7Q8N684 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF7Q8N684 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CPSF7Q8N684 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
CPSF7Q8N684 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF7Q8N684 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF7Q8N684 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC24.43■■□□□ 1.5
CPSF7Q8N684 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF7Q8N684 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CPSF7Q8N684 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CPSF7Q8N684 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPSF7Q8N684 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
CPSF7Q8N684 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CPSF7Q8N684 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.4■■□□□ 1.5
CPSF7Q8N684 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPSF7Q8N684 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPSF7Q8N684 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
CPSF7Q8N684 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CPSF7Q8N684 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CPSF7Q8N684 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC24.39■■□□□ 1.49
CPSF7Q8N684 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF7Q8N684 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF7Q8N684 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
CPSF7Q8N684 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.38■■□□□ 1.49
CPSF7Q8N684 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CPSF7Q8N684 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CPSF7Q8N684 AC018358.1-201ENST00000631079 1402 ntBASIC24.37■■□□□ 1.49
CPSF7Q8N684 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.37■■□□□ 1.49
CPSF7Q8N684 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.37■■□□□ 1.49
CPSF7Q8N684 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC24.37■■□□□ 1.49
CPSF7Q8N684 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CPSF7Q8N684 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.37■■□□□ 1.49
CPSF7Q8N684 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC24.36■■□□□ 1.49
CPSF7Q8N684 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CPSF7Q8N684 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPSF7Q8N684 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CPSF7Q8N684 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.36■■□□□ 1.49
CPSF7Q8N684 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF7Q8N684 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.35■■□□□ 1.49
CPSF7Q8N684 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF7Q8N684 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF7Q8N684 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.35■■□□□ 1.49
CPSF7Q8N684 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CPSF7Q8N684 AC145676.1-201ENST00000514988 2004 ntBASIC24.35■■□□□ 1.49
CPSF7Q8N684 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 ZNRF2P2-203ENST00000454624 420 ntBASIC24.34■■□□□ 1.49
CPSF7Q8N684 HGH1-207ENST00000628266 258 ntTSL 5 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CPSF7Q8N684 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.34■■□□□ 1.49
CPSF7Q8N684 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.33■■□□□ 1.49
CPSF7Q8N684 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.33■■□□□ 1.49
CPSF7Q8N684 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF7Q8N684 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF7Q8N684 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24.32■■□□□ 1.48
CPSF7Q8N684 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF7Q8N684 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF7Q8N684 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CPSF7Q8N684 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CPSF7Q8N684 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.31■■□□□ 1.48
CPSF7Q8N684 DUX4L29-201ENST00000425409 679 ntBASIC24.31■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 242.2 ms