Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00311Q8N616 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
LINC00311Q8N616 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.5■□□□□ 0.87
LINC00311Q8N616 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.5■□□□□ 0.87
LINC00311Q8N616 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
LINC00311Q8N616 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00311Q8N616 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
LINC00311Q8N616 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00311Q8N616 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00311Q8N616 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
LINC00311Q8N616 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00311Q8N616 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
LINC00311Q8N616 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
LINC00311Q8N616 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
LINC00311Q8N616 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00311Q8N616 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
LINC00311Q8N616 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00311Q8N616 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
LINC00311Q8N616 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00311Q8N616 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00311Q8N616 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.46■□□□□ 0.87
LINC00311Q8N616 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
LINC00311Q8N616 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.45■□□□□ 0.86
LINC00311Q8N616 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.45■□□□□ 0.86
LINC00311Q8N616 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00311Q8N616 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.44■□□□□ 0.86
LINC00311Q8N616 AC008813.1-201ENST00000536597 885 ntBASIC20.44■□□□□ 0.86
LINC00311Q8N616 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.44■□□□□ 0.86
LINC00311Q8N616 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.44■□□□□ 0.86
LINC00311Q8N616 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
LINC00311Q8N616 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
LINC00311Q8N616 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
LINC00311Q8N616 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00311Q8N616 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00311Q8N616 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.42■□□□□ 0.86
LINC00311Q8N616 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LINC00311Q8N616 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00311Q8N616 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.41■□□□□ 0.86
LINC00311Q8N616 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC20.41■□□□□ 0.86
LINC00311Q8N616 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
LINC00311Q8N616 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00311Q8N616 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LINC00311Q8N616 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.39■□□□□ 0.85
LINC00311Q8N616 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LINC00311Q8N616 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.39■□□□□ 0.85
LINC00311Q8N616 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
LINC00311Q8N616 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LINC00311Q8N616 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
LINC00311Q8N616 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00311Q8N616 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.38■□□□□ 0.85
LINC00311Q8N616 CR559946.2-201ENST00000623684 991 ntBASIC20.38■□□□□ 0.85
LINC00311Q8N616 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00311Q8N616 AL121749.1-202ENST00000609313 2153 ntBASIC20.38■□□□□ 0.85
LINC00311Q8N616 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LINC00311Q8N616 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LINC00311Q8N616 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
LINC00311Q8N616 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
LINC00311Q8N616 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00311Q8N616 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LINC00311Q8N616 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.37■□□□□ 0.85
LINC00311Q8N616 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.36■□□□□ 0.85
LINC00311Q8N616 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00311Q8N616 MIR3648-2-201ENST00000581792 180 ntBASIC20.36■□□□□ 0.85
LINC00311Q8N616 MIR3648-1-201ENST00000615959 180 ntBASIC20.36■□□□□ 0.85
LINC00311Q8N616 AC148477.6-201ENST00000623746 465 ntBASIC20.36■□□□□ 0.85
LINC00311Q8N616 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00311Q8N616 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LINC00311Q8N616 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LINC00311Q8N616 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00311Q8N616 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00311Q8N616 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00311Q8N616 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC20.35■□□□□ 0.85
LINC00311Q8N616 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LINC00311Q8N616 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
LINC00311Q8N616 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00311Q8N616 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.34■□□□□ 0.85
LINC00311Q8N616 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC00311Q8N616 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
LINC00311Q8N616 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC00311Q8N616 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LINC00311Q8N616 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.33■□□□□ 0.85
LINC00311Q8N616 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00311Q8N616 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LINC00311Q8N616 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
LINC00311Q8N616 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LINC00311Q8N616 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
LINC00311Q8N616 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms