Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SYCE1Q8N0S2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.54■■□□□ 1.84
SYCE1Q8N0S2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SYCE1Q8N0S2 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 MIR6090-201ENST00000622481 60 ntBASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.53■■□□□ 1.84
SYCE1Q8N0S2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SYCE1Q8N0S2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
SYCE1Q8N0S2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SYCE1Q8N0S2 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SYCE1Q8N0S2 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYCE1Q8N0S2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYCE1Q8N0S2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SYCE1Q8N0S2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.5■■□□□ 1.83
SYCE1Q8N0S2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYCE1Q8N0S2 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYCE1Q8N0S2 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SYCE1Q8N0S2 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SYCE1Q8N0S2 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYCE1Q8N0S2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYCE1Q8N0S2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SYCE1Q8N0S2 AL449106.1-201ENST00000608517 1980 ntBASIC26.49■■□□□ 1.83
SYCE1Q8N0S2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
SYCE1Q8N0S2 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
SYCE1Q8N0S2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SYCE1Q8N0S2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
SYCE1Q8N0S2 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC26.46■■□□□ 1.83
SYCE1Q8N0S2 AC091060.1-201ENST00000623524 1766 ntBASIC26.46■■□□□ 1.83
SYCE1Q8N0S2 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.46■■□□□ 1.83
SYCE1Q8N0S2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.46■■□□□ 1.83
SYCE1Q8N0S2 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SYCE1Q8N0S2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SYCE1Q8N0S2 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SYCE1Q8N0S2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.45■■□□□ 1.82
SYCE1Q8N0S2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.45■■□□□ 1.82
SYCE1Q8N0S2 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 DUX4L28-201ENST00000623687 678 ntBASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SYCE1Q8N0S2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SYCE1Q8N0S2 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
SYCE1Q8N0S2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SYCE1Q8N0S2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.43■■□□□ 1.82
SYCE1Q8N0S2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC26.43■■□□□ 1.82
SYCE1Q8N0S2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SYCE1Q8N0S2 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SYCE1Q8N0S2 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SYCE1Q8N0S2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SYCE1Q8N0S2 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SYCE1Q8N0S2 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SYCE1Q8N0S2 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SYCE1Q8N0S2 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.39■■□□□ 1.82
SYCE1Q8N0S2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.39■■□□□ 1.82
SYCE1Q8N0S2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.39■■□□□ 1.82
SYCE1Q8N0S2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC26.39■■□□□ 1.82
SYCE1Q8N0S2 MIR3665-201ENST00000578708 105 ntBASIC26.39■■□□□ 1.82
SYCE1Q8N0S2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.39■■□□□ 1.81
SYCE1Q8N0S2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.38■■□□□ 1.81
SYCE1Q8N0S2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYCE1Q8N0S2 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYCE1Q8N0S2 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SYCE1Q8N0S2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.37■■□□□ 1.81
SYCE1Q8N0S2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.37■■□□□ 1.81
SYCE1Q8N0S2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.37■■□□□ 1.81
SYCE1Q8N0S2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SYCE1Q8N0S2 AC145676.1-201ENST00000514988 2004 ntBASIC26.36■■□□□ 1.81
SYCE1Q8N0S2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SYCE1Q8N0S2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.36■■□□□ 1.81
SYCE1Q8N0S2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.36■■□□□ 1.81
SYCE1Q8N0S2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.36■■□□□ 1.81
SYCE1Q8N0S2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYCE1Q8N0S2 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.34■■□□□ 1.81
SYCE1Q8N0S2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYCE1Q8N0S2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SYCE1Q8N0S2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SYCE1Q8N0S2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
SYCE1Q8N0S2 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SYCE1Q8N0S2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
SYCE1Q8N0S2 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SYCE1Q8N0S2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.31■■□□□ 1.8
SYCE1Q8N0S2 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.31■■□□□ 1.8
SYCE1Q8N0S2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SYCE1Q8N0S2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.3■■□□□ 1.8
SYCE1Q8N0S2 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SYCE1Q8N0S2 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
SYCE1Q8N0S2 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.29■■□□□ 1.8
SYCE1Q8N0S2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms