Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.36■■■□□ 2.61
SMC5Q8IY18 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC31.36■■■□□ 2.61
SMC5Q8IY18 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.35■■■□□ 2.61
SMC5Q8IY18 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.35■■■□□ 2.61
SMC5Q8IY18 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMC5Q8IY18 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.35■■■□□ 2.61
SMC5Q8IY18 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SMC5Q8IY18 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMC5Q8IY18 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SMC5Q8IY18 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SMC5Q8IY18 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
SMC5Q8IY18 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
SMC5Q8IY18 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.33■■■□□ 2.61
SMC5Q8IY18 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMC5Q8IY18 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.32■■■□□ 2.6
SMC5Q8IY18 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SMC5Q8IY18 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.31■■■□□ 2.6
SMC5Q8IY18 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SMC5Q8IY18 AC110285.7-201ENST00000624417 1536 ntBASIC31.29■■■□□ 2.6
SMC5Q8IY18 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMC5Q8IY18 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC31.29■■■□□ 2.6
SMC5Q8IY18 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMC5Q8IY18 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC31.29■■■□□ 2.6
SMC5Q8IY18 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SMC5Q8IY18 DUX4L29-201ENST00000425409 679 ntBASIC31.28■■■□□ 2.6
SMC5Q8IY18 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SMC5Q8IY18 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
SMC5Q8IY18 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMC5Q8IY18 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
SMC5Q8IY18 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SMC5Q8IY18 RPS2P35-201ENST00000443417 897 ntBASIC31.26■■■□□ 2.59
SMC5Q8IY18 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SMC5Q8IY18 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SMC5Q8IY18 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.25■■■□□ 2.59
SMC5Q8IY18 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.24■■■□□ 2.59
SMC5Q8IY18 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
SMC5Q8IY18 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC31.24■■■□□ 2.59
SMC5Q8IY18 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.23■■■□□ 2.59
SMC5Q8IY18 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.23■■■□□ 2.59
SMC5Q8IY18 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.23■■■□□ 2.59
SMC5Q8IY18 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
SMC5Q8IY18 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SMC5Q8IY18 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.22■■■□□ 2.59
SMC5Q8IY18 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMC5Q8IY18 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.22■■■□□ 2.59
SMC5Q8IY18 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMC5Q8IY18 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
SMC5Q8IY18 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.21■■■□□ 2.59
SMC5Q8IY18 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMC5Q8IY18 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SMC5Q8IY18 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
SMC5Q8IY18 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
SMC5Q8IY18 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC31.2■■■□□ 2.59
SMC5Q8IY18 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC31.2■■■□□ 2.58
SMC5Q8IY18 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SMC5Q8IY18 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.19■■■□□ 2.58
SMC5Q8IY18 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
SMC5Q8IY18 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SMC5Q8IY18 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SMC5Q8IY18 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.18■■■□□ 2.58
SMC5Q8IY18 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
SMC5Q8IY18 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SMC5Q8IY18 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SMC5Q8IY18 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC31.17■■■□□ 2.58
SMC5Q8IY18 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.17■■■□□ 2.58
SMC5Q8IY18 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.16■■■□□ 2.58
SMC5Q8IY18 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.15■■■□□ 2.58
SMC5Q8IY18 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SMC5Q8IY18 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
SMC5Q8IY18 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SMC5Q8IY18 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SMC5Q8IY18 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SMC5Q8IY18 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
SMC5Q8IY18 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.13■■■□□ 2.57
SMC5Q8IY18 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMC5Q8IY18 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMC5Q8IY18 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC31.13■■■□□ 2.57
SMC5Q8IY18 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
SMC5Q8IY18 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
SMC5Q8IY18 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
SMC5Q8IY18 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.12■■■□□ 2.57
SMC5Q8IY18 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.12■■■□□ 2.57
SMC5Q8IY18 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
SMC5Q8IY18 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SMC5Q8IY18 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.1■■■□□ 2.57
SMC5Q8IY18 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC31.09■■■□□ 2.57
SMC5Q8IY18 AL449106.1-201ENST00000608517 1980 ntBASIC31.09■■■□□ 2.57
SMC5Q8IY18 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.09■■■□□ 2.57
SMC5Q8IY18 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SMC5Q8IY18 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
SMC5Q8IY18 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SMC5Q8IY18 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMC5Q8IY18 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SMC5Q8IY18 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.07■■■□□ 2.56
SMC5Q8IY18 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.07■■■□□ 2.56
SMC5Q8IY18 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SMC5Q8IY18 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.07■■■□□ 2.56
SMC5Q8IY18 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMC5Q8IY18 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SMC5Q8IY18 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 649.7 ms